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build failures
BiocondaBot edited this page Jan 18, 2025
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392 revisions
Automatically updated (nightly) list of build failures that currently block builds from the listed recipes. Please help with fixing them!
| recipe | downloads | depending | skiplisted | category | build failures | pull requests | reason |
|---|---|---|---|---|---|---|---|
| muscle | 343722 | 175 | True | compiler error | linux-64 | show | |
| muscle | 343722 | 175 | True | compiler error | linux-aarch64 | show | |
| perl-html-tidy | 166891 | 142 | True | linux-64 | show | ||
| perl-html-tidy | 166891 | 142 | True | osx-64 | show | ||
| clustalw | 274026 | 133 | True | compiler error | osx-64 | show | |
| paml | 235615 | 116 | True | compiler error | osx-64 | show | |
| perl-bio-samtools | 234185 | 113 | True | osx-64 | show | ||
| dialign-tx | 22334 | 113 | True | linux-64 | show | ||
| dialign-tx | 22334 | 113 | True | osx-64 | show | ||
| t-coffee | 86349 | 112 | True | source download error | osx-64 | show | |
| t_coffee | 86349 | 112 | True | source download error | osx-64 | show | |
| iqtree | 831176 | 40 | True | compiler error | osx-64 | show | |
| vcflib | 199740 | 40 | True | compiler error | linux-64 | show | |
| vcflib | 199740 | 40 | True | compiler error | linux-aarch64 | show | |
| vcflib | 199740 | 40 | True | compiler error | osx-64 | show | |
| cyvcf2 | 425810 | 35 | True | dependency issue | linux-64 | show | |
| cyvcf2 | 425810 | 35 | True | compiler error | linux-aarch64 | show | |
| freebayes | 334421 | 32 | True | compiler error | linux-64 | show | |
| freebayes | 334421 | 32 | True | compiler error | linux-aarch64 | show | |
| freebayes | 334421 | 32 | True | dependency issue | osx-64 | show | |
| racon | 211698 | 28 | True | compiler error | osx-arm64 | show | |
| tbl2asn-forever | 73738 | 25 | True | test failure | osx-64 | show | |
| grep | 49957 | 25 | True | linux-64 | show | new versions in conda-forge; mulled-build reports "package grep-3.4-h93e12ee_5 i... s excluded by strict repo priority"
|
|
| grep | 49957 | 25 | True | osx-64 | show | new versions in conda-forge; mulled-build reports "package grep-3.4-h93e12ee_5 i... s excluded by strict repo priority"
|
|
| megahit | 244698 | 22 | True | compiler error | linux-64 | show | |
| megahit | 244698 | 22 | True | compiler error | linux-aarch64 | show | |
| sorted_nearest | 148416 | 21 | True | test failure | osx-64 | show | |
| cdbtools | 93138 | 20 | True | source download error | linux-64 | show | |
| cdbtools | 93138 | 20 | True | source download error | linux-aarch64 | show | |
| cdbtools | 93138 | 20 | True | source download error | osx-64 | show | |
| augustus | 198433 | 18 | True | compiler error | linux-64 | show | |
| augustus | 198433 | 18 | True | compiler error | osx-64 | show | |
| augustus/3.3.3 | 198433 | 18 | True | compiler error | linux-64 | show | |
| augustus/3.3.3 | 198433 | 18 | True | compiler error | osx-64 | show | |
| bioconductor-gsva | 66511 | 16 | True | dependency issue | linux-aarch64 | show | r-magick is not built for aarch64 |
| logomaker | 51265 | 16 | True | linux-64 | show | also on conda-forge | |
| logomaker | 51265 | 16 | True | osx-64 | show | also on conda-forge | |
| bioconductor-alabaster.base | 2223 | 16 | True | osx-64 | show | ||
| kallisto | 205899 | 15 | True | compiler error | osx-arm64 | show | |
| pyopenms | 37277 | 15 | True | osx-64 | show | ||
| genometools-genometools | 87271 | 14 | True | dependency issue | linux-64 | show | |
| genometools-genometools | 87271 | 14 | True | dependency issue | linux-aarch64 | show | |
| genometools-genometools | 87271 | 14 | True | dependency issue | osx-64 | show | |
| bedops | 192082 | 13 | True | compiler error | osx-64 | show | |
| mummer4 | 49168 | 11 | True | compiler error | linux-64 | show | |
| mummer4 | 49168 | 11 | True | compiler error | linux-aarch64 | show | |
| bellmans-gapc | 27675 | 11 | True | compiler error | linux-aarch64 | show | |
| bioconductor-alabaster.matrix | 2107 | 11 | True | dependency issue | osx-64 | show | |
| ntcard | 20228 | 9 | True | compiler error | osx-64 | show | |
| ntcard | 20228 | 9 | True | compiler error | osx-arm64 | show | |
| bioconductor-alabaster.ranges | 2118 | 9 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| fastx_toolkit | 69542 | 8 | True | compiler error | osx-64 | show | |
| bioconductor-alabaster.se | 2076 | 8 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| bifrost | 28022 | 7 | True | compiler error | osx-arm64 | show | |
| piler-cr | 16375 | 7 | True | compiler error | osx-64 | show | |
| medaka | 269228 | 6 | True | dependency issue | linux-64 | show | |
| bioconductor-chromvar | 45344 | 6 | False | osx-64 | show | ||
| r-pcalg | 4220 | 6 | True | compiler error | osx-64 | show | |
| khmer | 72366 | 5 | True | compiler error | linux-64 | show | |
| khmer | 72366 | 5 | True | compiler error | linux-aarch64 | show | |
| bioconductor-lpsymphony | 60395 | 5 | True | compiler error | osx-64 | show | |
| r-alakazam | 19465 | 5 | True | conda/mamba bug | linux-64 | show | r-alakazam wanted to move from conda-forge but strict priority blocks it |
| r-alakazam | 19465 | 5 | True | test failure | osx-64 | show | |
| seqfu | 141970 | 4 | True | compiler error | osx-64 | show | |
| wfmash | 31925 | 4 | True | compiler error | linux-64 | show | |
| wfmash | 31925 | 4 | True | compiler error | linux-aarch64 | show | |
| bioconductor-rbowtie2 | 31244 | 4 | True | compiler error | linux-64 | show | zlib is somehow still being searched for in main system lib |
| bioconductor-rbowtie2 | 31244 | 4 | True | compiler error | linux-aarch64 | show | zlib is somehow still being searched for in main system lib |
| bioconductor-rbowtie2 | 31244 | 4 | True | compiler error | osx-64 | show | zlib is somehow still being searched for in main system lib |
| recon | 25398 | 4 | True | source download error | linux-64 | show | |
| recon | 25398 | 4 | True | source download error | linux-aarch64 | show | |
| recon | 25398 | 4 | True | source download error | osx-64 | show | |
| bcalm | 24275 | 4 | True | compiler error | osx-64 | show | |
| rnashapes | 21170 | 4 | True | compiler error | osx-64 | show | |
| libmems | 13106 | 4 | True | compiler error | linux-64 | show | |
| rapsearch | 12398 | 4 | True | compiler error | linux-64 | show | |
| r-dnet | 11931 | 4 | True | dependency issue | linux-64 | show | |
| bioconductor-epinem | 10153 | 4 | True | dependency issue | linux-64 | show | needs r-bourtroslab.plotting.general added to conda-forge |
| bioconductor-epinem | 10153 | 4 | True | dependency issue | osx-64 | show | needs r-bourtroslab.plotting.general added to conda-forge |
| bioconductor-alabaster.sce | 2027 | 4 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| hhsuite | 299810 | 3 | True | compiler error | linux-64 | show | |
| hhsuite | 299810 | 3 | True | compiler error | linux-aarch64 | show | |
| moabs | 85540 | 3 | True | compiler error | linux-64 | show | |
| moabs | 85540 | 3 | True | compiler error | osx-64 | show | |
| bioconductor-monocle | 54653 | 3 | True | dependency issue | osx-64 | show | |
| bioconductor-msa | 32000 | 3 | True | compiler error | osx-64 | show | |
| phipack | 13231 | 3 | True | compiler error | osx-64 | show | |
| mauvealigner | 12483 | 3 | True | compiler error | linux-64 | show | |
| bioconductor-rawrr | 5515 | 3 | True | dependency issue | linux-64 | show | needs mono |
| bioconductor-rawrr | 5515 | 3 | True | dependency issue | osx-64 | show | needs mono |
| ms2rescore-rs | 2663 | 3 | True | osx-64 | show | unsupported wheel on this platform | |
| bioconductor-mosdef | 59 | 3 | True | dependency issue | osx-64 | show | clusterprofiler needs to be fixed |
| usher | 250240 | 2 | True | compiler error | linux-64 | show | |
| usher | 250240 | 2 | True | compiler error | linux-aarch64 | show | |
| usher | 250240 | 2 | True | compiler error | osx-64 | show | |
| bioconductor-diffbind | 88456 | 2 | True | compiler error | osx-64 | show | |
| libsequence | 56638 | 2 | True | compiler error | osx-64 | show | |
| libsequence/1.8.4 | 56638 | 2 | True | linux-64 | show | ||
| pbcopper | 53525 | 2 | True | compiler error | linux-64 | show | |
| pbcopper | 53525 | 2 | True | compiler error | linux-aarch64 | show | |
| dinopy | 52884 | 2 | True | dependency issue | linux-64 | show | |
| dinopy | 52884 | 2 | True | dependency issue | linux-aarch64 | show | |
| dinopy | 52884 | 2 | True | dependency issue | osx-64 | show | |
| razers3 | 48625 | 2 | True | compiler error | osx-64 | show | |
| python-bioext | 41713 | 2 | True | compiler error | osx-arm64 | show | |
| bioconductor-bgeedb | 37533 | 2 | True | dependency issue | linux-64 | show | needs r-bread package to be added to conda-forge |
| bioconductor-bgeedb | 37533 | 2 | True | dependency issue | osx-64 | show | needs r-bread package to be added to conda-forge |
| plastid | 30811 | 2 | True | dependency issue | linux-64 | show | |
| plastid | 30811 | 2 | True | osx-64 | show | ||
| bioconductor-gmapr | 29220 | 2 | True | compiler error | linux-aarch64 | show | samtools/libbam.a error adding symbols file in wrong format |
| bioconductor-gmapr | 29220 | 2 | True | test failure | osx-64 | show | |
| assembly-stats | 28854 | 2 | True | conda/mamba bug | osx-64 | show | see https://github.com/conda/conda-build/issues/5429 |
| bioconductor-bambu | 28192 | 2 | True | linux-64 | show | waiting for r-xgboost R 4.4 migration on conda-forge https://github.com/conda-fo... rge/xgboost-feedstock/pull/196
|
|
| bioconductor-bambu | 28192 | 2 | True | dependency issue | linux-aarch64 | show | |
| bioconductor-bambu | 28192 | 2 | True | osx-64 | show | ||
| links | 27045 | 2 | True | compiler error | linux-64 | show | |
| links | 27045 | 2 | True | compiler error | linux-aarch64 | show | |
| evidencemodeler | 23702 | 2 | True | compiler error | osx-64 | show | |
| minia | 22193 | 2 | True | compiler error | linux-64 | show | |
| snap | 22014 | 2 | True | source download error | linux-64 | show | |
| qax | 18422 | 2 | True | compiler error | linux-64 | show | |
| qax | 18422 | 2 | True | compiler error | osx-64 | show | |
| mindthegap | 17830 | 2 | True | compiler error | osx-64 | show | |
| r-grain | 17765 | 2 | True | dependency issue | osx-64 | show | dependency bioconductor-rgraphviz is also skipped for osx-64 |
| ms2pip | 16054 | 2 | True | linux-64 | show | pydantic validator error | |
| ms2pip | 16054 | 2 | True | osx-64 | show | pydantic validator error | |
| vmatch | 15630 | 2 | True | linux-64 | show | ||
| sga | 14922 | 2 | True | compiler error | osx-64 | show | |
| treekin | 14397 | 2 | True | test failure | linux-64 | show | |
| ltr_finder | 13743 | 2 | True | compiler error | osx-64 | show | |
| ont_vbz_hdf_plugin | 13121 | 2 | True | compiler error | linux-64 | show | |
| wise2 | 8974 | 2 | True | compiler error | osx-64 | show | |
| sonlib | 7614 | 2 | True | compiler error | linux-64 | show | |
| sonlib | 7614 | 2 | True | compiler error | osx-64 | show | |
| pywfa | 6848 | 2 | True | linux-64 | show | sha256 mismatch | |
| pywfa | 6848 | 2 | True | checksum mismatch | osx-64 | show | |
| irf | 3471 | 2 | True | compiler error | osx-64 | show | |
| bioconductor-alabaster.string | 2052 | 2 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| unifrac-binaries | 257683 | 1 | True | osx-64 | show | ||
| moments | 203275 | 1 | True | checksum mismatch | linux-64 | show | |
| moments | 203275 | 1 | True | checksum mismatch | linux-aarch64 | show | |
| moments | 203275 | 1 | True | checksum mismatch | osx-64 | show | |
| proteinortho | 161228 | 1 | True | compiler error | osx-64 | show | |
| jcvi | 158013 | 1 | True | disk space | linux-64 | show | The bulk GitHub Actions runner ran out of disk space. Try in a PR. |
| jcvi | 158013 | 1 | True | disk space | linux-aarch64 | show | |
| gimmemotifs | 141860 | 1 | True | linux-64 | show | ||
| gimmemotifs | 141860 | 1 | True | osx-64 | show | ||
| ariba | 98622 | 1 | True | dependency issue | linux-64 | show | |
| mothur | 97057 | 1 | True | linux-64 | show | ||
| ivar | 96095 | 1 | True | compiler error | linux-64 | show | |
| ivar | 96095 | 1 | True | compiler error | linux-aarch64 | show | |
| comet-ms | 72385 | 1 | True | compiler error | linux-64 | show | |
| comet-ms | 72385 | 1 | True | compiler error | linux-aarch64 | show | |
| comet-ms/2021010 | 72385 | 1 | True | linux-64 | show | ||
| duphold | 56381 | 1 | True | dependency issue | linux-64 | show | |
| parsnp | 52941 | 1 | True | test failure | osx-64 | show | |
| bam-readcount | 52545 | 1 | True | compiler error | linux-64 | show | |
| bam-readcount | 52545 | 1 | True | compiler error | linux-aarch64 | show | |
| bam-readcount | 52545 | 1 | True | compiler error | osx-64 | show | |
| bamutil | 46566 | 1 | True | osx-64 | show | ||
| graphmap | 45067 | 1 | True | compiler error | linux-64 | show | |
| graphmap | 45067 | 1 | True | compiler error | linux-aarch64 | show | |
| rscape | 40849 | 1 | True | compiler error | osx-64 | show | |
| mbg | 39174 | 1 | True | compiler error | linux-64 | show | |
| mbg | 39174 | 1 | True | compiler error | linux-aarch64 | show | |
| genmap | 32382 | 1 | True | linux-64 | show | ||
| genmap | 32382 | 1 | True | osx-64 | show | ||
| cancerit-allelecount | 32328 | 1 | True | compiler error | linux-64 | show | |
| cancerit-allelecount | 32328 | 1 | True | compiler error | linux-aarch64 | show | cannot find ./src/bam_access.o No such file or directory |
| sqt | 30591 | 1 | True | dependency issue | linux-64 | show | |
| sqt | 30591 | 1 | True | dependency issue | osx-64 | show | |
| bioconductor-scrnaseq | 29311 | 1 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| maxentpy | 29155 | 1 | True | compiler error | linux-64 | show | |
| maxentpy | 29155 | 1 | True | compiler error | osx-64 | show | |
| arcs | 28128 | 1 | True | compiler error | linux-64 | show | |
| arcs | 28128 | 1 | True | compiler error | linux-aarch64 | show | |
| rnablueprint | 27291 | 1 | True | compiler error | linux-64 | show | |
| rnablueprint | 27291 | 1 | True | compiler error | osx-64 | show | |
| bioconductor-scdblfinder | 22225 | 1 | True | dependency issue | linux-64 | show | |
| bioconductor-rhisat2 | 22155 | 1 | True | compiler error | osx-64 | show | 'iostream' file not found |
| pasa | 21993 | 1 | True | compiler error | osx-64 | show | |
| snoscan | 21085 | 1 | True | linux-64 | show | ||
| snoscan | 21085 | 1 | True | osx-64 | show | ||
| bioconductor-scds | 20893 | 1 | True | dependency issue | linux-64 | show | needs updated r-xgboost package to be added to conda-forge (for R 4.4) |
| bioconductor-scds | 20893 | 1 | True | dependency issue | osx-64 | show | needs updated r-xgboost package to be added to conda-forge (for R 4.4) |
| chopper | 17276 | 1 | True | compiler error | linux-64 | show | |
| chopper | 17276 | 1 | True | compiler error | osx-64 | show | |
| fastq-tools | 17193 | 1 | True | compiler error | osx-64 | show | |
| bioconductor-omnipathr | 16782 | 1 | True | linux-64 | show | error removing tempfile at end of build | |
| bioconductor-omnipathr | 16782 | 1 | True | osx-64 | show | error removing tempfile at end of build | |
| glimmer | 15411 | 1 | True | linux-64 | show | ||
| bioconductor-bayesspace | 14804 | 1 | True | dependency issue | linux-64 | show | |
| bioconductor-bayesspace | 14804 | 1 | True | dependency issue | osx-64 | show | |
| ucsc-clustergenes | 14771 | 1 | True | linux-64 | show | ||
| ucsc-bamtopsl | 14465 | 1 | True | linux-aarch64 | show | ||
| bioconductor-celldex | 14422 | 1 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| yahmm | 14328 | 1 | True | compiler error | linux-64 | show | |
| yahmm | 14328 | 1 | True | compiler error | osx-64 | show | |
| pullseq | 14235 | 1 | True | compiler error | osx-64 | show | |
| r-tmae | 14136 | 1 | True | dependency issue | linux-64 | show | |
| bioconductor-rsbml | 12199 | 1 | True | compiler error | linux-64 | show | expected primary-expression before 'const' |
| bioconductor-rsbml | 12199 | 1 | True | compiler error | osx-64 | show | |
| cuttlefish | 10927 | 1 | True | compiler error | linux-64 | show | |
| cuttlefish | 10927 | 1 | True | compiler error | osx-arm64 | show | |
| dragmap | 10172 | 1 | True | linux-64 | show | missing license | |
| ont-modkit | 10006 | 1 | True | compiler error | osx-64 | show | |
| mnnpy | 9626 | 1 | True | dependency issue | linux-64 | show | |
| mnnpy | 9626 | 1 | True | dependency issue | osx-64 | show | |
| mccortex | 9288 | 1 | True | linux-64 | show | ||
| mccortex | 9288 | 1 | True | osx-64 | show | ||
| ra | 8882 | 1 | True | linux-64 | show | ||
| curves | 8724 | 1 | True | compiler error | osx-64 | show | |
| bioconductor-nempi | 8239 | 1 | True | dependency issue | linux-64 | show | needs bioconductor-epinem to be fixed |
| bioconductor-nempi | 8239 | 1 | True | dependency issue | osx-64 | show | needs bioconductor-epinem to be fixed |
| tgsgapcloser | 8120 | 1 | True | compiler error | osx-64 | show | |
| transrate-tools | 8048 | 1 | True | linux-64 | show | ||
| biolite-tools | 7090 | 1 | True | osx-64 | show | ||
| porechop_abi | 7002 | 1 | True | osx-64 | show | ||
| bs_call | 6907 | 1 | True | osx-64 | show | ||
| godmd | 6567 | 1 | True | linux-64 | show | ||
| godmd | 6567 | 1 | True | osx-64 | show | ||
| kwip | 6489 | 1 | True | linux-64 | show | ||
| pgsa | 5946 | 1 | True | linux-64 | show | ||
| phylommand | 5168 | 1 | True | compiler error | osx-64 | show | |
| clan | 4263 | 1 | True | compiler error | linux-64 | show | |
| bioconductor-rbwa | 4127 | 1 | True | compiler error | linux-64 | show | seems to be using system libraries, and zlib is not installed on system. |
| nextpolish | 3893 | 1 | True | compiler error | osx-64 | show | |
| pulchra | 3803 | 1 | True | source download error | linux-64 | show | |
| dist_est | 2592 | 1 | True | compiler error | osx-64 | show | |
| libshorah | 2488 | 1 | True | linux-64 | show | ||
| libshorah | 2488 | 1 | True | osx-64 | show | ||
| fast-edit-distance | 2261 | 1 | True | compiler error | linux-64 | show | pip can't find version from source |
| fast-edit-distance | 2261 | 1 | True | compiler error | linux-aarch64 | show | pip can't find version from source |
| fast-edit-distance | 2261 | 1 | True | compiler error | osx-64 | show | pip can't find version from source |
| fast-edit-distance | 2261 | 1 | True | compiler error | osx-arm64 | show | pip can't find version from source |
| bioconductor-alabaster.mae | 2036 | 1 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| bioconductor-alabaster.vcf | 2003 | 1 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| bioconductor-alabaster.spatial | 1984 | 1 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| bioconductor-alabaster.bumpy | 1984 | 1 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| deepchopper-cli | 962 | 1 | True | compiler error | osx-64 | show | |
| unifrac | 536355 | 0 | True | test failure | linux-64 | show | |
| unifrac | 536355 | 0 | True | test failure | osx-64 | show | |
| rust-bio-tools | 277141 | 0 | True | linux-64 | show | ||
| rust-bio-tools | 277141 | 0 | True | linux-aarch64 | show | ||
| biobambam | 111097 | 0 | True | compiler error | linux-aarch64 | show | |
| gemini | 108144 | 0 | True | dependency issue | linux-64 | show | needs bcolz, which is now unsupported for a year |
| gemini | 108144 | 0 | True | dependency issue | linux-aarch64 | show | |
| gemini | 108144 | 0 | True | dependency issue | osx-64 | show | needs bcolz, which is now unsupported for a year |
| mikado | 99323 | 0 | True | linux-64 | show | ||
| mikado | 99323 | 0 | True | osx-64 | show | ||
| r-bcbiornaseq | 89426 | 0 | True | linux-64 | show | ||
| cdna_cupcake | 86043 | 0 | True | linux-64 | show | ||
| cdna_cupcake | 86043 | 0 | True | osx-64 | show | ||
| genenotebook | 83564 | 0 | True | linux-64 | show | ||
| megalodon | 83054 | 0 | True | test failure | linux-64 | show | |
| megalodon | 83054 | 0 | True | test failure | linux-aarch64 | show | |
| megalodon | 83054 | 0 | True | test failure | osx-64 | show | |
| jbrowse | 77204 | 0 | True | linux-64 | show | ||
| masurca | 77118 | 0 | True | linux-64 | show | ||
| bioconductor-titancna | 71267 | 0 | True | osx-64 | show | ||
| longshot | 68959 | 0 | True | osx-64 | show | ||
| tracy | 67297 | 0 | True | linux-64 | show | exists in conda-forge | |
| tracy | 67297 | 0 | True | linux-aarch64 | show | exists in conda-forge | |
| tracy | 67297 | 0 | True | osx-64 | show | exists in conda-forge | |
| annonars | 54726 | 0 | True | linux-64 | show | ||
| annonars | 54726 | 0 | True | linux-aarch64 | show | ||
| bioconductor-chipcomp | 52348 | 0 | True | linux-aarch64 | show | ||
| bioconductor-chipcomp | 52348 | 0 | True | osx-64 | show | ||
| krakenuniq | 51964 | 0 | True | linux-64 | show | ||
| krakenuniq | 51964 | 0 | True | osx-64 | show | ||
| poppunk | 51030 | 0 | True | osx-64 | show | ||
| r-hemdag | 50752 | 0 | True | osx-64 | show | ||
| preseq | 50744 | 0 | True | linux-64 | show | ||
| preseq | 50744 | 0 | True | linux-aarch64 | show | ||
| r-sigminer | 48999 | 0 | True | linux-64 | show | ||
| r-sigminer | 48999 | 0 | True | linux-aarch64 | show | ||
| r-sigminer | 48999 | 0 | True | osx-64 | show | ||
| iced | 48307 | 0 | True | linux-64 | show | ||
| iced | 48307 | 0 | True | osx-64 | show | ||
| bioconductor-podkat | 46445 | 0 | True | linux-64 | show | ||
| artic-tools | 46111 | 0 | True | linux-64 | show | ||
| artic-tools | 46111 | 0 | True | linux-aarch64 | show | ||
| bioconductor-acme | 46089 | 0 | True | osx-64 | show | ||
| bioconductor-chromstar | 45458 | 0 | True | compiler error | osx-64 | show | 13:49:15 BIOCONDA INFO (ERR) /opt/mambaforge/envs/bioconda/conda-bld/bioconducto... r-chromstar_1701870247148/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_p/include/omp.h:491:39: error: expected 'match' clause on 'omp declare variant' directive 13:49:15 BIOCONDA INFO (ERR) #pragma omp begin declare variant match(device={kind(nohost)})
|
| bioconductor-metahdep | 44834 | 0 | True | osx-64 | show | ||
| bioconductor-messina | 44817 | 0 | True | osx-64 | show | ||
| percolator | 44441 | 0 | True | linux-64 | show | ||
| bioconductor-ping | 43346 | 0 | True | osx-64 | show | ||
| bioconductor-motifbreakr | 42776 | 0 | True | linux-64 | show | ||
| mehari | 40308 | 0 | True | linux-64 | show | ||
| mehari | 40308 | 0 | True | linux-aarch64 | show | ||
| cgpbigwig | 40170 | 0 | True | linux-64 | show | ||
| cgpbigwig | 40170 | 0 | True | linux-aarch64 | show | ||
| cnv_facets | 39845 | 0 | True | linux-64 | show | ||
| cnv_facets | 39845 | 0 | True | linux-aarch64 | show | ||
| bioconductor-variantfiltering | 38249 | 0 | True | osx-64 | show | ||
| arriba | 38011 | 0 | True | linux-64 | show | ||
| arriba | 38011 | 0 | True | linux-aarch64 | show | ||
| arriba | 38011 | 0 | True | osx-64 | show | ||
| bioconductor-isolde | 37973 | 0 | True | osx-64 | show | ||
| bioconductor-harshlight | 37837 | 0 | True | osx-64 | show | ||
| gangstr | 37771 | 0 | True | linux-64 | show | ||
| gangstr | 37771 | 0 | True | linux-aarch64 | show | ||
| gangstr | 37771 | 0 | True | osx-64 | show | ||
| variantbam | 36675 | 0 | True | linux-64 | show | ||
| bioconductor-splinter | 36273 | 0 | True | linux-64 | show | ||
| portcullis | 35982 | 0 | True | linux-64 | show | ||
| r-biodb | 35946 | 0 | True | linux-64 | show | ||
| ldblockshow | 35787 | 0 | True | linux-64 | show | ||
| ldblockshow | 35787 | 0 | True | osx-64 | show | ||
| filtlong | 35612 | 0 | True | linux-64 | show | ||
| filtlong | 35612 | 0 | True | linux-aarch64 | show | ||
| bioconductor-cytoml | 33501 | 0 | True | compiler error | linux-64 | show | |
| bioconductor-cytoml | 33501 | 0 | True | compiler error | osx-64 | show | |
| lorikeet-genome | 33431 | 0 | True | linux-64 | show | ||
| gat | 32863 | 0 | True | linux-64 | show | ||
| gat | 32863 | 0 | True | osx-64 | show | ||
| bioconductor-slalom | 32123 | 0 | True | osx-64 | show | ||
| bioconductor-dmrcatedata | 31681 | 0 | True | linux-64 | show | ||
| bioconductor-seq2pathway | 31680 | 0 | True | linux-64 | show | ||
| bioconductor-descan2 | 31159 | 0 | True | linux-aarch64 | show | ||
| ragout | 31135 | 0 | True | osx-64 | show | ||
| bioconductor-rmmquant | 31032 | 0 | True | osx-64 | show | ||
| bioconductor-yapsa | 30872 | 0 | True | linux-64 | show | ||
| bioconductor-rarevariantvis | 30837 | 0 | True | linux-64 | show | ||
| albatradis | 29996 | 0 | True | linux-64 | show | ||
| bioconductor-metabosignal | 29960 | 0 | True | linux-64 | show | ||
| bioconductor-r3cpet | 29765 | 0 | True | osx-64 | show | ||
| bioconductor-dmrcaller | 29446 | 0 | True | linux-aarch64 | show | ||
| bioconductor-esatac | 29410 | 0 | True | linux-64 | show | ||
| bioconductor-esatac | 29410 | 0 | True | dependency issue | linux-aarch64 | show | needs bioconductor-rbowtie2 |
| bioconductor-esatac | 29410 | 0 | True | osx-64 | show | ||
| bioconductor-matrixrider | 29344 | 0 | True | osx-64 | show | ||
| bamtocov | 29295 | 0 | True | linux-64 | show | ||
| bamtocov | 29295 | 0 | True | osx-64 | show | ||
| bioconductor-geneticsped | 29083 | 0 | True | osx-64 | show | ||
| bioconductor-aneufinder | 28976 | 0 | True | osx-64 | show | ||
| bioconductor-ccfindr | 28704 | 0 | True | linux-64 | show | ||
| bioconductor-ccfindr | 28704 | 0 | True | osx-64 | show | ||
| bioconductor-deepbluer | 28361 | 0 | True | linux-64 | show | ||
| express | 28334 | 0 | True | linux-64 | show | ||
| samwell | 28037 | 0 | True | linux-64 | show | ||
| samwell | 28037 | 0 | True | osx-64 | show | ||
| bioconductor-sictools | 27376 | 0 | True | linux-64 | show | ||
| bioconductor-elmer | 26921 | 0 | True | linux-64 | show | ||
| starseqr | 26833 | 0 | True | linux-64 | show | ||
| starseqr | 26833 | 0 | True | osx-64 | show | ||
| strling | 26305 | 0 | True | linux-64 | show | ||
| pheniqs | 26259 | 0 | True | linux-64 | show | ||
| pheniqs | 26259 | 0 | True | osx-64 | show | ||
| malva | 26205 | 0 | True | linux-64 | show | ||
| r-dartr | 25969 | 0 | True | linux-64 | show | ||
| bioconductor-ihwpaper | 25704 | 0 | True | osx-64 | show | ||
| ucsc-farandomize | 25428 | 0 | True | linux-64 | show | ||
| regtools | 25086 | 0 | True | osx-64 | show | ||
| bioconductor-signaturesearch | 24670 | 0 | True | osx-64 | show | ||
| admixtools | 24660 | 0 | True | osx-64 | show | ||
| bioconductor-adacgh2 | 24430 | 0 | True | linux-64 | show | ||
| bioconductor-adacgh2 | 24430 | 0 | True | osx-64 | show | ||
| pymvpa | 24383 | 0 | True | linux-64 | show | ||
| pymvpa | 24383 | 0 | True | osx-64 | show | ||
| bioconductor-rmassbank | 24074 | 0 | True | osx-64 | show | ||
| cellsnp-lite | 23749 | 0 | True | linux-64 | show | ||
| cellsnp-lite | 23749 | 0 | True | linux-aarch64 | show | ||
| cellsnp-lite | 23749 | 0 | True | osx-64 | show | ||
| cellsnp-lite | 23749 | 0 | True | osx-arm64 | show | ||
| pandaseq | 23682 | 0 | True | osx-64 | show | ||
| pandaseq/2.8.1 | 23682 | 0 | True | osx-64 | show | ||
| bioconductor-gnet2 | 23665 | 0 | True | linux-64 | show | ||
| bioconductor-gnet2 | 23665 | 0 | True | linux-aarch64 | show | ||
| bioconductor-gnet2 | 23665 | 0 | True | osx-64 | show | ||
| pcaone | 23572 | 0 | True | linux-64 | show | ||
| rosella | 23532 | 0 | True | linux-64 | show | ||
| r-histonehmm | 23284 | 0 | True | linux-64 | show | ||
| bioconductor-antiprofilesdata | 23282 | 0 | True | linux-64 | show | ||
| bioconductor-amaretto | 22812 | 0 | True | osx-64 | show | ||
| d4tools | 22563 | 0 | True | osx-64 | show | ||
| guidescan | 22435 | 0 | True | linux-64 | show | ||
| guidescan | 22435 | 0 | True | linux-aarch64 | show | ||
| bioconductor-pasillatranscriptexpr | 22342 | 0 | True | checksum mismatch | linux-64 | show | |
| ksw | 22294 | 0 | True | linux-64 | show | ||
| ksw | 22294 | 0 | True | osx-64 | show | ||
| hera | 21942 | 0 | True | conda/mamba bug | linux-64 | show | duplicate name in conda-forge |
| gembs | 21899 | 0 | True | linux-64 | show | ||
| gembs | 21899 | 0 | True | osx-64 | show | ||
| bioconductor-singlecelltk | 21769 | 0 | True | linux-64 | show | ||
| bioconductor-singlecelltk | 21769 | 0 | True | dependency issue | osx-64 | show | bioconductor-alabaster.base needs to be fixed |
| r-exomedepth | 21729 | 0 | True | osx-64 | show | ||
| bioconductor-genestructuretools | 21499 | 0 | True | linux-64 | show | ||
| fastq-multx | 21369 | 0 | True | osx-64 | show | ||
| bioconductor-ritan | 21322 | 0 | True | linux-64 | show | ||
| mrbayes | 21303 | 0 | True | osx-64 | show | ||
| bioconductor-ccmap | 21218 | 0 | True | linux-64 | show | ||
| bioconductor-beadarrayusecases | 21055 | 0 | True | linux-64 | show | ||
| radsex | 20905 | 0 | True | linux-64 | show | ||
| bioconductor-evaluomer | 20840 | 0 | True | linux-64 | show | ||
| ucsc-checkhgfindspec | 20825 | 0 | True | linux-64 | show | ||
| ucsc-checkhgfindspec | 20825 | 0 | True | linux-aarch64 | show | ||
| bioconductor-etec16s | 20688 | 0 | True | dependency issue | linux-64 | show | metagenomeseq 1.47 Not ready for BioC 3.20 |
| bioconductor-moda | 20654 | 0 | True | linux-64 | show | ||
| bioconductor-parathyroidse | 20588 | 0 | True | linux-64 | show | ||
| simka | 20534 | 0 | True | osx-64 | show | ||
| bioconductor-interactivedisplay | 19947 | 0 | True | linux-64 | show | ||
| bioconductor-ahensdbs | 19744 | 0 | True | linux-64 | show | ||
| bioconductor-msd16s | 19714 | 0 | True | dependency issue | linux-64 | show | metagenomeseq 1.47 Not ready for BioC 3.20 |
| ma | 19643 | 0 | True | linux-64 | show | ||
| r-recetox-aplcms | 19316 | 0 | True | dependency issue | linux-64 | show | |
| treebest | 18954 | 0 | True | osx-64 | show | ||
| abra2 | 18750 | 0 | True | linux-64 | show | ||
| abra2 | 18750 | 0 | True | linux-aarch64 | show | ||
| bioconductor-italics | 18654 | 0 | True | linux-64 | show | ||
| bioconductor-tweedeseqcountdata | 18582 | 0 | True | linux-64 | show | ||
| elector | 18321 | 0 | True | linux-64 | show | ||
| pxblat | 18308 | 0 | True | linux-64 | show | ||
| pxblat | 18308 | 0 | True | osx-64 | show | ||
| sequenza-utils | 18307 | 0 | True | osx-64 | show | ||
| bioconductor-rnainteractmapk | 18076 | 0 | True | dependency issue | linux-64 | show | bioconductor-rnainteract not available for 3.20 yet |
| metilene | 18073 | 0 | True | osx-64 | show | ||
| pegasuspy | 18032 | 0 | True | linux-64 | show | ||
| pegasuspy | 18032 | 0 | True | osx-64 | show | ||
| orfipy | 17914 | 0 | True | osx-64 | show | ||
| bioconductor-circrnaprofiler | 17893 | 0 | True | linux-64 | show | ||
| treemix | 17589 | 0 | True | osx-64 | show | ||
| r-minems2 | 17553 | 0 | True | osx-64 | show | ||
| bioconductor-iclusterplus | 17497 | 0 | True | linux-64 | show | ||
| bioconductor-iclusterplus | 17497 | 0 | True | linux-aarch64 | show | ||
| bioconductor-iclusterplus | 17497 | 0 | True | osx-64 | show | ||
| bioconductor-cetf | 17338 | 0 | True | osx-64 | show | ||
| r-fastbaps | 17209 | 0 | True | osx-64 | show | ||
| r-mixkernel | 17168 | 0 | True | linux-64 | show | ||
| perl-sanger-cgp-battenberg | 16641 | 0 | True | linux-64 | show | ||
| r-samr | 16349 | 0 | True | linux-64 | show | ||
| r-samr | 16349 | 0 | True | osx-64 | show | ||
| akt | 16063 | 0 | True | compiler error | osx-64 | show | |
| bioconductor-gpumagic | 16019 | 0 | True | linux-64 | show | ||
| magicblast | 15929 | 0 | True | linux-64 | show | ||
| magicblast | 15929 | 0 | True | osx-64 | show | ||
| grafimo | 15907 | 0 | True | linux-64 | show | ||
| leviosam | 15893 | 0 | True | linux-64 | show | ||
| velocyto.py | 15875 | 0 | True | test failure | linux-64 | show | |
| bioconductor-rnamodr.data | 15784 | 0 | True | linux-64 | show | ||
| bioconductor-mousegastrulationdata | 15718 | 0 | True | linux-64 | show | ||
| spacepharer | 15688 | 0 | True | linux-64 | show | ||
| spacepharer | 15688 | 0 | True | linux-aarch64 | show | ||
| plass | 15687 | 0 | True | linux-64 | show | ||
| plass | 15687 | 0 | True | linux-aarch64 | show | ||
| chia-rep | 15674 | 0 | True | linux-64 | show | ||
| chia-rep | 15674 | 0 | True | osx-64 | show | ||
| tiptoft | 15614 | 0 | True | linux-64 | show | ||
| tiptoft | 15614 | 0 | True | osx-64 | show | ||
| bioconductor-rfarm | 15606 | 0 | True | linux-64 | show | ||
| verkko | 15599 | 0 | True | linux-64 | show | ||
| verkko | 15599 | 0 | True | osx-64 | show | ||
| microphaser | 15587 | 0 | True | linux-64 | show | ||
| calib | 15335 | 0 | True | linux-64 | show | ||
| calib | 15335 | 0 | True | osx-64 | show | ||
| genoboo | 15134 | 0 | True | linux-64 | show | ||
| interproscan | 15107 | 0 | True | linux-64 | show | ||
| vadr | 15094 | 0 | True | linux-64 | show | ||
| pydnase | 15042 | 0 | True | linux-64 | show | ||
| pydnase | 15042 | 0 | True | osx-64 | show | ||
| sicer2 | 15034 | 0 | True | linux-64 | show | ||
| sicer2 | 15034 | 0 | True | osx-64 | show | ||
| ucsc-hubcheck | 14836 | 0 | True | linux-64 | show | ||
| ucsc-hgtrackdb | 14835 | 0 | True | linux-64 | show | ||
| autogrid | 14778 | 0 | True | compiler error | osx-64 | show | |
| corset | 14735 | 0 | True | linux-64 | show | ||
| corset | 14735 | 0 | True | osx-64 | show | ||
| varfish-server-worker | 14448 | 0 | True | linux-64 | show | ||
| varfish-server-worker | 14448 | 0 | True | linux-aarch64 | show | ||
| r-nanopore | 14371 | 0 | True | linux-64 | show | ||
| r-nanopore | 14371 | 0 | True | osx-64 | show | ||
| chorus2 | 14336 | 0 | True | dependency issue | linux-64 | show | |
| chorus2 | 14336 | 0 | True | dependency issue | osx-64 | show | |
| pourrna | 14073 | 0 | True | linux-64 | show | ||
| pourrna | 14073 | 0 | True | osx-64 | show | ||
| tadbit | 14036 | 0 | True | linux-64 | show | ||
| tadbit | 14036 | 0 | True | osx-64 | show | ||
| methylpy | 13923 | 0 | True | linux-64 | show | ||
| methylpy | 13923 | 0 | True | osx-64 | show | ||
| kissplice | 13874 | 0 | True | osx-64 | show | ||
| goldrush | 13827 | 0 | True | osx-64 | show | ||
| hifiasm_meta | 13796 | 0 | True | osx-64 | show | ||
| r-enchantr | 13649 | 0 | True | linux-64 | show | ||
| bte | 13355 | 0 | True | linux-64 | show | ||
| bte | 13355 | 0 | True | osx-64 | show | ||
| pyfba | 13318 | 0 | True | linux-64 | show | ||
| pyfba | 13318 | 0 | True | osx-64 | show | ||
| blastalign | 13230 | 0 | True | linux-64 | show | ||
| balrog | 13214 | 0 | True | osx-64 | show | ||
| bioconductor-umi4cats | 13126 | 0 | True | linux-64 | show | ||
| kmasker | 13121 | 0 | True | linux-64 | show | ||
| kmasker | 13121 | 0 | True | osx-64 | show | ||
| r-pore | 13029 | 0 | True | osx-64 | show | ||
| r-fgwas | 12925 | 0 | True | linux-64 | show | ||
| bioconductor-nanomethviz | 12837 | 0 | True | linux-64 | show | ||
| bwa-meme | 12770 | 0 | True | linux-64 | show | ||
| bioconductor-epigrahmm | 12740 | 0 | True | linux-64 | show | ||
| bolt | 12705 | 0 | True | linux-64 | show | ||
| cellprofiler | 12688 | 0 | True | linux-64 | show | ||
| r-mmgenome | 12684 | 0 | True | osx-64 | show | ||
| nwalign3 | 12579 | 0 | True | compiler error | linux-64 | show | |
| nwalign3 | 12579 | 0 | True | compiler error | osx-64 | show | |
| ghm | 12349 | 0 | True | linux-64 | show | ||
| bioconductor-synextend | 12335 | 0 | True | linux-64 | show | ||
| perl-atlas-modules | 12212 | 0 | True | linux-64 | show | ||
| perl-atlas-modules | 12212 | 0 | True | osx-64 | show | ||
| genblastg | 11930 | 0 | True | linux-64 | show | ||
| genblastg | 11930 | 0 | True | osx-64 | show | ||
| spring | 11577 | 0 | True | linux-64 | show | ||
| spring | 11577 | 0 | True | linux-aarch64 | show | ||
| bioconductor-screpertoire | 11536 | 0 | True | osx-64 | show | ||
| r-xgr | 11503 | 0 | True | linux-64 | show | ||
| igblast-parser | 11258 | 0 | True | linux-64 | show | ||
| igblast-parser | 11258 | 0 | True | osx-64 | show | ||
| r-tidygenomics | 11206 | 0 | True | osx-64 | show | ||
| bioconductor-uncoverapplib | 11104 | 0 | True | linux-64 | show | ||
| bioconductor-nanoporernaseq | 11053 | 0 | True | linux-64 | show | ||
| secedo | 11025 | 0 | True | linux-64 | show | ||
| secedo | 11025 | 0 | True | osx-64 | show | ||
| fastq-join | 10997 | 0 | True | osx-64 | show | ||
| squid | 10977 | 0 | True | linux-64 | show | ||
| r-conos | 10962 | 0 | True | osx-64 | show | ||
| sensv | 10917 | 0 | True | linux-64 | show | ||
| r-metalonda | 10914 | 0 | True | linux-64 | show | ||
| ryuto | 10794 | 0 | True | linux-64 | show | ||
| ryuto | 10794 | 0 | True | osx-64 | show | ||
| seqyclean | 10727 | 0 | True | osx-64 | show | ||
| hapog | 10699 | 0 | True | linux-64 | show | ||
| hapog | 10699 | 0 | True | osx-64 | show | ||
| bioconductor-musicatk | 10630 | 0 | True | dependency issue | linux-64 | show | needs r-conclust added to conda-forge |
| bioconductor-musicatk | 10630 | 0 | True | dependency issue | osx-64 | show | needs r-conclust added to conda-forge |
| bioconductor-pipecomp | 10577 | 0 | True | linux-64 | show | ||
| miranda | 10538 | 0 | True | source download error | linux-64 | show | lint fails due to license; source (presumably with license) unavailable |
| miranda | 10538 | 0 | True | osx-64 | show | ||
| appspam | 10274 | 0 | True | linux-64 | show | ||
| pkiss | 10268 | 0 | True | osx-64 | show | ||
| dropest | 10249 | 0 | True | linux-64 | show | ||
| ucsc-parahub | 10032 | 0 | True | linux-aarch64 | show | ||
| cassiopee | 10000 | 0 | True | linux-64 | show | ||
| cassiopee | 10000 | 0 | True | osx-64 | show | ||
| squeakr | 9985 | 0 | True | linux-64 | show | ||
| telescope | 9939 | 0 | True | compiler error | linux-64 | show | |
| telescope | 9939 | 0 | True | compiler error | osx-64 | show | |
| nimnexus | 9853 | 0 | True | linux-64 | show | ||
| breakdancer | 9749 | 0 | True | linux-64 | show | ||
| cobs | 9748 | 0 | True | linux-64 | show | ||
| cobs | 9748 | 0 | True | linux-aarch64 | show | ||
| cobs | 9748 | 0 | True | osx-64 | show | ||
| peakranger | 9657 | 0 | True | linux-64 | show | ||
| ucsc-endsinlf | 9634 | 0 | True | linux-64 | show | ||
| svict | 9591 | 0 | True | osx-64 | show | ||
| mockinbird | 9517 | 0 | True | linux-64 | show | ||
| mockinbird | 9517 | 0 | True | osx-64 | show | ||
| bioconductor-infinityflow | 9481 | 0 | True | linux-64 | show | ||
| bioconductor-orfhunter | 9459 | 0 | True | osx-64 | show | ||
| gapfiller | 9215 | 0 | True | linux-64 | show | ||
| r-quilt | 9173 | 0 | True | dependency issue | osx-64 | show | |
| gsearch | 9169 | 0 | True | compiler error | linux-64 | show | hnsw.file_dump this method takes 2 arguments but 1 argument was supplied |
| r-perfmeas | 9105 | 0 | True | osx-64 | show | ||
| r-tailfindr | 9040 | 0 | True | osx-64 | show | ||
| commet | 9035 | 0 | True | linux-64 | show | ||
| commet | 9035 | 0 | True | osx-64 | show | ||
| bioconductor-biggr | 9032 | 0 | True | linux-64 | show | ||
| ucsc-bedjointaboffset | 8952 | 0 | True | linux-64 | show | ||
| ucsc-bedjointaboffset | 8952 | 0 | True | linux-aarch64 | show | ||
| opencontactcli | 8881 | 0 | True | linux-64 | show | ||
| bsmap | 8823 | 0 | True | linux-64 | show | ||
| cytocad | 8802 | 0 | True | linux-64 | show | ||
| ogdf | 8788 | 0 | True | linux-64 | show | ||
| bioconductor-flames | 8703 | 0 | True | linux-64 | show | ||
| bioconductor-flames | 8703 | 0 | True | osx-64 | show | ||
| pfp | 8485 | 0 | True | linux-64 | show | ||
| bioconductor-summix | 8449 | 0 | True | linux-64 | show | ||
| bioconductor-dce | 8282 | 0 | True | linux-64 | show | ||
| bioconductor-autonomics | 8227 | 0 | True | linux-64 | show | ||
| bioconductor-bnem | 8187 | 0 | True | linux-64 | show | ||
| bioconductor-wppi | 8171 | 0 | True | dependency issue | linux-64 | show | needs bioconductor-omnipathr to be fixed |
| bioconductor-wppi | 8171 | 0 | True | dependency issue | osx-64 | show | needs bioconductor-omnipathr to be fixed |
| r-eacon | 8144 | 0 | True | linux-64 | show | ||
| r-tinyarray | 8116 | 0 | True | linux-64 | show | ||
| r-calder2 | 8086 | 0 | True | linux-64 | show | ||
| r-sigtree | 8037 | 0 | True | linux-64 | show | ||
| r-sigtree | 8037 | 0 | True | osx-64 | show | ||
| resmico | 8012 | 0 | True | linux-64 | show | ||
| resmico | 8012 | 0 | True | osx-64 | show | ||
| perl-cairo | 7970 | 0 | True | linux-64 | show | ||
| pe |