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build_failure.osx-64.yaml
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recipe_sha: e340e38e864df08918bbbdea4245d6f6b18516b3fde690f6981df4606061a84a # The hash of the recipe's meta.yaml at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
log: |2-
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/environ.py", line 1307, in install_actions
txn = solver.solve_for_transaction(prune=False, ignore_pinned=False)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda/core/solve.py", line 152, in solve_for_transaction
unlink_precs, link_precs = self.solve_for_diff(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda/core/solve.py", line 221, in solve_for_diff
final_precs = self.solve_final_state(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 223, in solve_final_state
out_state = self._solving_loop(in_state, out_state, index)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 303, in _solving_loop
solved = self._solve_attempt(in_state, out_state, index, attempt=attempt)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 414, in _solve_attempt
new_conflicts = self._maybe_raise_for_problems(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 712, in _maybe_raise_for_problems
self._maybe_raise_for_conda_build(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 805, in _maybe_raise_for_conda_build
raise exc
conda_libmamba_solver.conda_build_exceptions.ExplainedDependencyNeedsBuildingError: Unsatisfiable dependencies for platform osx-64: {MatchSpec(">=1.84.0,<1.85.0"), MatchSpec("bioconductor-biocviews==1.74.0=r44hdfd78af_0"), MatchSpec("bioconductor-limma==3.62.0=r44h2f393c0_0"), MatchSpec("r-base[version='>=4.4,<4.5.0a0']")}
Encountered problems while solving:
- nothing provides bioconductor-graph >=1.84.0,<1.85.0 needed by bioconductor-biocviews-1.74.0-r44hdfd78af_0
- package bioconductor-limma-3.62.0-r44h2f393c0_0 requires r-base >=4.4,<4.5.0a0, but none of the providers can be installed
Could not solve for environment specs
The following packages are incompatible
bioconductor-biocviews >=1.74.0,<1.75.0 is not installable because it requires
bioconductor-graph >=1.84.0,<1.85.0 , which does not exist (perhaps a missing channel);
bioconductor-limma >=3.62.0,<3.63.0 is installable and it requires
r-base >=4.4,<4.5.0a0 , which can be installed;
r-leidenbase >=0.1.9 is not installable because there are no viable options
r-leidenbase 0.1.12 would require
r-base >=4.2,<4.3.0a0 , which conflicts with any installable versions previously reported;
r-leidenbase [0.1.18|0.1.27] would require
r-base >=4.3,<4.4.0a0 , which conflicts with any installable versions previously reported.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/opt/mambaforge/envs/bioconda/bin/conda-build", line 11, in <module>
sys.exit(execute())
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/cli/main_build.py", line 589, in execute
api.build(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/api.py", line 209, in build
return build_tree(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/build.py", line 3712, in build_tree
packages_from_this = build(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/build.py", line 2338, in build
output_metas = expand_outputs([(m, need_source_download, need_reparse_in_env)])
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/render.py", line 916, in expand_outputs
for output_dict, m in deepcopy(_m).get_output_metadata_set(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/metadata.py", line 2658, in get_output_metadata_set
conda_packages = finalize_outputs_pass(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/metadata.py", line 1025, in finalize_outputs_pass
fm = finalize_metadata(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/render.py", line 650, in finalize_metadata
build_unsat, host_unsat = add_upstream_pins(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/render.py", line 491, in add_upstream_pins
host_deps, host_unsat, extra_run_specs_from_host = _read_upstream_pin_files(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/render.py", line 444, in _read_upstream_pin_files
deps, precs, unsat = get_env_dependencies(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/render.py", line 156, in get_env_dependencies
precs = environ.get_package_records(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/environ.py", line 938, in get_install_actions
precs = get_package_records(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/environ.py", line 938, in get_install_actions
precs = get_package_records(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/environ.py", line 938, in get_install_actions
precs = get_package_records(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/environ.py", line 891, in get_install_actions
_actions = _install_actions(prefix, index, specs, subdir=subdir)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_build/environ.py", line 1307, in install_actions
txn = solver.solve_for_transaction(prune=False, ignore_pinned=False)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda/core/solve.py", line 152, in solve_for_transaction
unlink_precs, link_precs = self.solve_for_diff(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda/core/solve.py", line 221, in solve_for_diff
final_precs = self.solve_final_state(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 223, in solve_final_state
out_state = self._solving_loop(in_state, out_state, index)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 303, in _solving_loop
solved = self._solve_attempt(in_state, out_state, index, attempt=attempt)
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 414, in _solve_attempt
new_conflicts = self._maybe_raise_for_problems(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 712, in _maybe_raise_for_problems
self._maybe_raise_for_conda_build(
File "/opt/mambaforge/envs/bioconda/lib/python3.10/site-packages/conda_libmamba_solver/solver.py", line 805, in _maybe_raise_for_conda_build
raise exc
conda_libmamba_solver.conda_build_exceptions.ExplainedDependencyNeedsBuildingError: Unsatisfiable dependencies for platform osx-64: {MatchSpec(">=1.84.0,<1.85.0"), MatchSpec("bioconductor-biocviews==1.74.0=r44hdfd78af_0"), MatchSpec("bioconductor-limma==3.62.0=r44h2f393c0_0"), MatchSpec("r-base[version='>=4.4,<4.5.0a0']")}
Encountered problems while solving:
- nothing provides bioconductor-graph >=1.84.0,<1.85.0 needed by bioconductor-biocviews-1.74.0-r44hdfd78af_0
- package bioconductor-limma-3.62.0-r44h2f393c0_0 requires r-base >=4.4,<4.5.0a0, but none of the providers can be installed
Could not solve for environment specs
The following packages are incompatible
bioconductor-biocviews >=1.74.0,<1.75.0 is not installable because it requires
bioconductor-graph >=1.84.0,<1.85.0 , which does not exist (perhaps a missing channel);
bioconductor-limma >=3.62.0,<3.63.0 is installable and it requires
r-base >=4.4,<4.5.0a0 , which can be installed;
r-leidenbase >=0.1.9 is not installable because there are no viable options
r-leidenbase 0.1.12 would require
r-base >=4.2,<4.3.0a0 , which conflicts with any installable versions previously reported;
r-leidenbase [0.1.18|0.1.27] would require
r-base >=4.3,<4.4.0a0 , which conflicts with any installable versions previously reported.
# Last 100 lines of the build log.
category: |-
dependency issue