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build_failure.osx-64.yaml
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recipe_sha: df0e28d1dd4ef17d166db0dc2b7182f5236143bc233da26cf3970b2205e3d1ea # The commit at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
log: |2-
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 149, in prepare_metadata_for_build_wheel
return hook(metadata_directory, config_settings)
File "/opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/setuptools/build_meta.py", line 380, in prepare_metadata_for_build_wheel
self.run_setup()
File "/opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/setuptools/build_meta.py", line 338, in run_setup
exec(code, locals())
File "<string>", line 15, in <module>
ModuleNotFoundError: No module named 'scipy._build_utils'
error: subprocess-exited-with-error
Preparing metadata (pyproject.toml) did not run successfully.
exit code: 1
> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
full command: /opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/bin/python /opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmp3i4ffc8_
cwd: /opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/work
Preparing metadata (pyproject.toml): finished with status 'error'
error: metadata-generation-failed
Encountered error while generating package metadata.
> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
Exception information:
Traceback (most recent call last):
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/operations/build/metadata.py", line 35, in generate_metadata
distinfo_dir = backend.prepare_metadata_for_build_wheel(metadata_dir)
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/utils/misc.py", line 713, in prepare_metadata_for_build_wheel
return super().prepare_metadata_for_build_wheel(
File "$PREFIX/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_impl.py", line 186, in prepare_metadata_for_build_wheel
return self._call_hook('prepare_metadata_for_build_wheel', {
File "$PREFIX/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_impl.py", line 311, in _call_hook
self._subprocess_runner(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/utils/subprocess.py", line 252, in runner
call_subprocess(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
raise error
pip._internal.exceptions.InstallationSubprocessError: Preparing metadata (pyproject.toml) exited with 1
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/cli/base_command.py", line 169, in exc_logging_wrapper
status = run_func(*args)
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
return func(self, options, args)
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/commands/install.py", line 377, in run
requirement_set = resolver.resolve(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 73, in resolve
collected = self.factory.collect_root_requirements(root_reqs)
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 491, in collect_root_requirements
req = self._make_requirement_from_install_req(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 453, in _make_requirement_from_install_req
cand = self._make_candidate_from_link(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
self._link_candidate_cache[link] = LinkCandidate(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
super().__init__(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
self.dist = self._prepare()
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
dist = self._prepare_distribution()
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/operations/prepare.py", line 516, in prepare_linked_requirement
return self._prepare_linked_requirement(req, parallel_builds)
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/operations/prepare.py", line 631, in _prepare_linked_requirement
dist = _get_prepared_distribution(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
abstract_dist.prepare_distribution_metadata(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
self.req.prepare_metadata()
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/req/req_install.py", line 555, in prepare_metadata
self.metadata_directory = generate_metadata(
File "$PREFIX/lib/python3.10/site-packages/pip/_internal/operations/build/metadata.py", line 37, in generate_metadata
raise MetadataGenerationFailed(package_details=details) from error
pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
Removed file://$SRC_DIR from build tracker '/private/tmp/pip-build-tracker-oudien0u'
Removed build tracker: '/private/tmp/pip-build-tracker-oudien0u'
Traceback (most recent call last):
File "/opt/mambaforge/envs/bioconda/bin/conda-mambabuild", line 10, in <module>
sys.exit(main())
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 256, in main
call_conda_build(action, config)
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
result = api.build(
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/api.py", line 180, in build
return build_tree(
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/build.py", line 3078, in build_tree
packages_from_this = build(metadata, stats,
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/build.py", line 2198, in build
utils.check_call_env(cmd, env=env, rewrite_stdout_env=rewrite_env,
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/utils.py", line 451, in check_call_env
return _func_defaulting_env_to_os_environ("call", *popenargs, **kwargs)
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/utils.py", line 427, in _func_defaulting_env_to_os_environ
raise subprocess.CalledProcessError(proc.returncode, _args)
subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/opt/mambaforge/envs/bioconda/conda-bld/mikado_1685552972203/work/conda_build.sh']' returned non-zero exit status 1.
# Last 100 lines of the build log.