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Integration with JabRef online #7832

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Integration with JabRef online #7832

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Commits on Jun 6, 2021

  1. add apollo graphlql stuff

    Siedlerchr committed Jun 6, 2021
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  2. fix graphqlsource dir

    Siedlerchr committed Jun 6, 2021
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  3. add annotaitons and okio

    Siedlerchr committed Jun 6, 2021
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  4. use apollo jvm

    Siedlerchr committed Jun 6, 2021
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  5. fix modulartiy issues

    Siedlerchr committed Jun 6, 2021
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  6. Add kotlin library

    tobiasdiez authored Jun 6, 2021
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  9. set rootpackage

    Siedlerchr committed Jun 6, 2021
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Commits on Jun 7, 2021

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Commits on Jun 8, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main:
      Refactoring existing unit tests into parametrized tests (#7700)
      Replace <p> in localization by \n (#7279)
      Bump byte-buddy-parent from 1.11.0 to 1.11.1 (#7800)
      Bump org.javamodularity.moduleplugin from 1.8.6 to 1.8.7 (#7799)
      Bump mockito-core from 3.10.0 to 3.11.0 (#7801)
      Bump classgraph from 4.8.106 to 4.8.108 (#7802)
      Update .markdownlint.yml
      Ignore slant.co links
      GitBook: [main] 3 pages and 17 assets modified
      GitBook: [main] one page modified
      GitBook: [main] one page modified
      GitBook: [main] 6 pages and 42 assets modified
    
    # Conflicts:
    #	build.gradle
    Siedlerchr committed Jun 8, 2021
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  2. Merge branch 'jabrefonline' of github.com:JabRef/jabref into jabrefon…

    …line
    
    * 'jabrefonline' of github.com:JabRef/jabref:
    
    # Conflicts:
    #	build.gradle
    Siedlerchr committed Jun 8, 2021
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Commits on Jun 11, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main:
      Added auto-key-generation task to task-progress (#7797)
      cleanup temporary files, use prefix "jabref-" (#7811)
      Add easier how-to for checklist (#7813)
      Fix annotation + package of ACMPortalParserTest (#7812)
      Implemented a select all button for the library import function (issue #7786) (#7808)
      Fix for issue 4682 : Restructuring the side pane structure having additional functionality and merging the remove group menus (#7714)
    Siedlerchr committed Jun 11, 2021
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  2. try patching apollo for eclipse

    not workin yet
    Siedlerchr committed Jun 11, 2021
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Commits on Jun 16, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main:
      [Bot] Update CSL styles (#7824)
      Pin version of citeproc-java (#7827)
      JournalAbbreviation search feature (#7804)
      Bump fontbox from 2.0.23 to 2.0.24 (#7815)
      Revert "Bump org.eclipse.jgit (#7820)" (#7823)
      Bump bcprov-jdk15on from 1.68 to 1.69 (#7816)
      Bump postgresql from 42.2.20 to 42.2.21 (#7817)
      Bump org.eclipse.jgit (#7820)
      Bump mockito-core from 3.11.0 to 3.11.1 (#7819)
      Bump pdfbox from 2.0.23 to 2.0.24 (#7818)
      Bump byte-buddy-parent from 1.11.1 to 1.11.2 (#7821)
      Bump xmpbox from 2.0.23 to 2.0.24 (#7822)
    Siedlerchr committed Jun 16, 2021
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  2. try with all unnamed

    Siedlerchr committed Jun 16, 2021
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Commits on Jun 17, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main:
      Update Gradle Wrapper from 7.0.2 to 7.1. (#7829)
      Oobranch b : add utilies (#7787)
    Siedlerchr committed Jun 17, 2021
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  2. compile custom apollo variant using shadow jar

    prevent split packages
    Siedlerchr committed Jun 17, 2021
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Commits on Jun 19, 2021

  1. add apollo jar building

    Siedlerchr committed Jun 19, 2021
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  2. Change jar name

    Siedlerchr committed Jun 19, 2021
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  3. chang eeclipse output

    Siedlerchr committed Jun 19, 2021
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  5. fix checkstyle

    Siedlerchr committed Jun 19, 2021
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  6. align version

    Siedlerchr committed Jun 19, 2021
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Commits on Jun 20, 2021

  1. add info on modules

    Siedlerchr committed Jun 20, 2021
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Commits on Jun 22, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main:
      New Crowdin updates (#7843)
      Refactoring and addition of unit tests (#7597)
      CLI option to write XMP metadata to pdfs (#7814)
      Add query validation for web search (#7809)
      change eclipse default output dir (#7842)
      Bump lucene-queryparser from 8.8.2 to 8.9.0 (#7835)
      Bump libreoffice from 7.1.3 to 7.1.4 (#7836)
      Bump postgresql from 42.2.21 to 42.2.22 (#7839)
      Bump org.eclipse.jgit (#7838)
      Bump byte-buddy-parent from 1.11.2 to 1.11.5 (#7837)
      Bump unoloader from 7.1.3 to 7.1.4 (#7841)
      Ms Office Export patent author as inventor (#7831)
      Abbreviation toggle within the JournalEditorViewModel now ignores curly braces (issue #7773) (#7807)
    Siedlerchr committed Jun 22, 2021
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  2. cleanup

    Regenerate the queries without data
    Siedlerchr committed Jun 22, 2021
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  5. Fix typo

    tobiasdiez authored Jun 22, 2021
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  6. Fix another typo

    tobiasdiez authored Jun 22, 2021
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Commits on Jul 29, 2021

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  2. Update Library.java

    tobiasdiez authored Jul 29, 2021
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  3. Update settings.gradle

    tobiasdiez authored Jul 29, 2021
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  4. Update build.gradle

    tobiasdiez authored Jul 29, 2021
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Commits on Aug 20, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main: (110 commits)
      Extract PushTo names into model (#8005)
      Refactor processCitation in GrobidService to match processPdf (#8003)
      Improved progress indication for fulltext-index operations (#7981)
      Reordered Pdf-Importer priorities (#8001)
      Implement more pdf importers (#7947)
      Adding icon picker for group dialog issue#6142 (#7776)
      Fix possible NPE in exporter with empty charset (#7979)
      Fix icon color (#7994)
      Bump slf4j-api from 2.0.0-alpha2 to 2.0.0-alpha4 (#7991)
      Bump classgraph from 4.8.112 to 4.8.114 (#7990)
      Bump mariadb-java-client from 2.7.3 to 2.7.4 (#7992)
      Bump jsoup from 1.14.1 to 1.14.2 (#7993)
      New yaml issue template (#7983)
      [Bot] Update CSL styles (#7985)
      Reordered items in main table right-click menu (#7952)
      Fulltext Index: Only index local pdf files (#7980)
      Bump WyriHaximus/github-action-wait-for-status from 1.3 to 1.4 (#7973)
      Bump byte-buddy-parent from 1.11.9 to 1.11.12 (#7974)
      Bump classgraph from 4.8.110 to 4.8.112 (#7975)
      Bump checkstyle from 8.45 to 8.45.1 (#7978)
      ...
    
    # Conflicts:
    #	src/main/java/module-info.java
    Siedlerchr committed Aug 20, 2021
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  2. change to new schema

    Siedlerchr committed Aug 20, 2021
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  3. fix mutation

    Siedlerchr committed Aug 20, 2021
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  4. Merge branch 'jabrefonline' of github.com:JabRef/jabref into jabrefon…

    …line
    
    * 'jabrefonline' of github.com:JabRef/jabref:
      Update build.gradle
      Update settings.gradle
      Update Library.java
    
    # Conflicts:
    #	src/main/java/module-info.java
    Siedlerchr committed Aug 20, 2021
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Commits on Oct 10, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main: (149 commits)
      Add Tutorials for javafx
      lint
      Add changelot
      Open folder on mac and highlight file
      Add Tests to DoiCleanup (#8124)
      Improve Drag and Drop in Custom Entry types dialog (#8121)
      Show preview also for available styles (#8110)
      udpate to javafx 17.0.0.1
      Don't throw exception when validating invalid paths (#8112)
      Bump jackson-dataformat-yaml from 2.12.5 to 2.13.0
      Bump jackson-datatype-jsr310 from 2.12.5 to 2.13.0
      Bump byte-buddy-parent from 1.11.15 to 1.11.18
      Bump classgraph from 4.8.116 to 4.8.121
      Bump checkstyle from 9.0 to 9.0.1
      remove iso charset, website returns utf8 for icar comp sci only returns one result
      fix springer fetcher Fix computer science fetcher
      Squashed 'buildres/csl/csl-locales/' changes from 7a507fc008..495f888637
      Squashed 'buildres/csl/csl-styles/' changes from 5facb37..3b00357
      Update CHANGELOG.md
      snap: Use lzo compression & switch to core20 base
      ...
    Siedlerchr committed Oct 10, 2021
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Commits on Nov 19, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main: (181 commits)
      Add of ADRs 22 and 23 (#8256)
      [Bot] Update CSL styles (#8245)
      Replace styfle/[email protected] by GitHub's "concurrency" feature (#8243)
      Bump gittools/actions from 0.9.10 to 0.9.11 (#8248)
      Bump commons-cli from 1.4 to 1.5.0 (#8250)
      Bump byte-buddy-parent from 1.12.0 to 1.12.1 (#8249)
      Bump antlr4 from 4.9.2 to 4.9.3 (#8251)
      Bump archunit-junit5-api from 0.21.0 to 0.22.0 (#8252)
      Fix search: NOT binds more than AND (#8241)
      New Crowdin updates (#8240)
      Make PdfGrobiImporterTest as FetcherTest
      Oobranch g : add actions (#7792)
      Fix mixed CRLF / CR (#8238)
      Fix "Library has changed externally" with CRLF markers (#8239)
      Fix for issue 8198, 8133 (#8229)
      Added more unit tests in AuthorTest (#8214)
      Add confirmation dialog for empty entries in JabRef (#8218)
      Fix entry editor column visibility (#8232)
      Use regexp to remove non-ASCII characters from DOI and inform user when data for valid DOI does not exist #8127 (#8228)
      Fix exception for search flags (#8237)
      ...
    Siedlerchr committed Nov 19, 2021
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Commits on Nov 30, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main:
      Consider directory pattern when checking if a file can be moved (#8244)
      Bump byte-buddy-parent from 1.12.1 to 1.12.2 (#8285)
      Bump unirest-java from 3.13.3 to 3.13.4 (#8283)
      Bump checkstyle from 9.1 to 9.2 (#8284)
      Bump classgraph from 4.8.135 to 4.8.137 (#8282)
      Do not resize main table columns in search dialog window (#8253)
      Fix NegativeArraySizeException (#8270)
      Update deployment.yml
      TEst
      Grand unified library properties (GRULPS) (#8264)
      Fixes RFC fetcher test case (#8271)
      Update Gradle Wrapper from 7.2 to 7.3 (#8246)
      Observable Preferences H (WorkingDir, getUser, NameFormatter, Version, SpecialFields) (#8260)
      Bump checkstyle from 9.0.1 to 9.1 (#8266)
      Bump mockito-core from 4.0.0 to 4.1.0 (#8267)
      Bump classgraph from 4.8.130 to 4.8.135 (#8268)
      Fix some fetcher tests (#8258)
      Clicking a DOI link in the preview pane no longer crashes (#8255)
    Siedlerchr committed Nov 30, 2021
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  3. use new builder

    Siedlerchr committed Nov 30, 2021
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Commits on Dec 20, 2021

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main: (46 commits)
      New Crowdin updates (#8349)
      Bump pdfbox from 2.0.24 to 2.0.25 (#8345)
      Bump fontbox from 2.0.24 to 2.0.25 (#8348)
      Bump xmlunit-core from 2.8.3 to 2.8.4 (#8347)
      Bump tika-core from 2.1.0 to 2.2.0 (#8346)
      Added missing executable bindings to various commands (#8342)
      Update Gradle Wrapper from 7.3.1 to 7.3.2. (#8343)
      Fix issues with writing metadata to pdfs (#8332)
      add tinylog test (#8339)
      Tinylog (#8226)
      Don't register any database changes to the indexer while dropping a file (#8334)
      Fix ACM fetcher (#8338)
      Squashed 'buildres/csl/csl-styles/' changes from 3bb4b5f..60bf7d5
      Exception shouldn't happen when pasting an entry with a publication date-range of form yyyy-yyyy (#8247)
      Refactor Sidepane logic (#8202)
      New translations JabRef_en.properties (Japanese) (#8331)
      Bump bcprov-jdk15on from 1.69 to 1.70 (#8333)
      Update Controlsfx to 11.1.1 (#8330)
      Update citeproc (#8329)
      Bump classgraph from 4.8.137 to 4.8.138 (#8327)
      ...
    
    # Conflicts:
    #	build.gradle
    Siedlerchr committed Dec 20, 2021
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  2. Update deps

    Siedlerchr committed Dec 20, 2021
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  3. checkstyle

    Siedlerchr committed Dec 20, 2021
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Commits on Oct 9, 2022

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Commits on Oct 11, 2022

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Commits on Oct 12, 2022

  1. fix tests

    tobiasdiez committed Oct 12, 2022
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Commits on Oct 13, 2022

  1. use ZonedDateTime

    tobiasdiez committed Oct 13, 2022
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Commits on Oct 18, 2022

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Commits on Oct 20, 2022

  1. Add pulling of changes

    tobiasdiez committed Oct 20, 2022
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Commits on Oct 21, 2022

  1. implement merge

    tobiasdiez committed Oct 21, 2022
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  2. add remote revision info

    tobiasdiez committed Oct 21, 2022
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  3. Extend transformer

    tobiasdiez committed Oct 21, 2022
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  4. fix login check

    tobiasdiez committed Oct 21, 2022
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Commits on Oct 23, 2022

  1. Add push method

    tobiasdiez committed Oct 23, 2022
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Commits on Oct 25, 2022

  1. fix build

    tobiasdiez committed Oct 25, 2022
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  2. add tests

    tobiasdiez committed Oct 25, 2022
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Commits on Oct 28, 2022

  1. fix tests

    tobiasdiez committed Oct 28, 2022
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Commits on Nov 3, 2022

  1. Print snapshots as json

    tobiasdiez committed Nov 3, 2022
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Commits on Nov 13, 2022

  1. Rename package to "online"

    tobiasdiez committed Nov 13, 2022
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  3. improve transformer

    tobiasdiez committed Nov 13, 2022
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  4. remove unnecessary tests

    tobiasdiez committed Nov 13, 2022
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Commits on Dec 16, 2022

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Commits on Nov 4, 2023

  1. Merge remote-tracking branch 'upstream/main' into jabrefonline

    * upstream/main: (1565 commits)
      Enable journal information fetcher directly in popup (#10598)
      Make generate button wider (#10588)
      make openRewrite stable again
      Rename cleanup_pr.yml to cleanup-pr.yml
      Changelog
      Fix failing fetcher tests (#10613)
      ShortDoi
      Fix CHANGELOG.md
      Bump commons-cli:commons-cli from 1.5.0 to 1.6.0 (#10607)
      Fix issue #9306: Move "Open only one instance of JabRef" preference option to somewhere else (#10602)
      Update README.md (#10604)
      Bump me.champeau.jmh from 0.7.1 to 0.7.2
      Bump org.beryx.jlink from 3.0.0 to 3.0.1
      Bump com.dlsc.gemsfx:gemsfx from 1.82.0 to 1.84.0
      Bump org.apache.logging.log4j:log4j-to-slf4j from 2.21.0 to 2.21.1
      Synchronize scrollbars in the change resolver dialog (#10587)
      Add button for a user to reset the cite command to the default value. (#10580)
      openrerwrite
      Update .github/PULL_REQUEST_TEMPLATE.md
      Update PULL_REQUEST_TEMPLATE.md
      ...
    
    # Conflicts:
    #	.devcontainer/devcontainer.json
    #	build.gradle
    #	src/main/java/org/jabref/gui/DefaultInjector.java
    #	src/main/java/org/jabref/gui/libraryproperties/general/GeneralProperties.fxml
    #	src/main/java/org/jabref/gui/libraryproperties/general/GeneralPropertiesView.java
    #	src/main/java/org/jabref/gui/libraryproperties/general/GeneralPropertiesViewModel.java
    #	src/main/java/org/jabref/logic/exporter/MetaDataSerializer.java
    #	src/main/java/org/jabref/logic/importer/util/MetaDataParser.java
    #	src/main/java/org/jabref/model/metadata/MetaData.java
    #	src/main/java/org/jabref/preferences/JabRefPreferences.java
    Siedlerchr committed Nov 4, 2023
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  2. fix build

    Siedlerchr committed Nov 4, 2023
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  3. fix buid

    Siedlerchr committed Nov 4, 2023
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  4. checkstyle

    Siedlerchr committed Nov 4, 2023
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Commits on Jan 7, 2024

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