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20 Open 192 Closed
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Issues list

Decide what do to when curators use different UniProt ids for the same gene in different publications discuss Future
#125 opened May 24, 2023 by CuzickA
@jseager7
22
Unused genes in curation sessions
#114 opened Dec 1, 2022 by jseager7
14
List of potential publications containing host gene data for future curation For Curation Future
#113 opened Nov 30, 2022 by CuzickA
Decide and document when species must match in primary annotation and AE Future
#111 opened Nov 15, 2022 by CuzickA
@jseager7
3
PMID 34399627: Peroxiredoxin Asp f3 Is Essential for Aspergillus fumigatus To Overcome Iron Limitation during Infection. Aspergillus fumigatus needs new PHIPO terms next
#108 opened Jul 8, 2022 by JonMWilkes
@JonMWilkes
8
PMID: 35468894 A fungal extracellular effector inactivates plant polygalacturonase-inhibiting protein effector eg effector with GO MF protein binding eg pathogen gene expressed by transgenic host first host target For Curation incorrect UniProt id used needs_checking next
#106 opened May 17, 2022 by CuzickA
@smvelasquez
48
PMID:32487759 Functional Coupling between the Unfolded Protein Response and Endoplasmic Reticulum/Golgi Ca 2+-ATPases Promotes Stress Tolerance, Cell Wall Biosynthesis, and Virulence of Aspergillus fumigatus Aspergillus fumigatus For Curation needs_checking next UniProt gene name update requested
#101 opened Mar 30, 2022 by CuzickA
@JonMWilkes
27
Examples of when it is not possible to curate metagenotype controls
#96 opened Mar 8, 2021 by CuzickA
1
Examples of sessions which may need need to switch between GfG and PHI phenotype work flows
#94 opened Jan 29, 2021 by CuzickA
1
PMID:26163574 A Phytophthora sojae Glycoside Hydrolase 12 Protein Is a Major Virulence Factor during Soybean Infection and Is Recognized as a PAMP discuss early acting virulence protein effector needs_checking
#93 opened Jan 26, 2021 by ValWood
@ValWood
4
PMID:28082413 XEG1 functions both as a MAMP and an essential virulence effector of Phy- tophthora spp. needs_checking next
#71 opened Feb 13, 2020 by ValWood
4
PMID: 30584105 Conserved fungal effector suppresses PAMP-triggered immunity by targeting plant immune kinases. Added 'Disease name' curation type effector Eg of 2 host protein physically interacting + ETI inducer INF1 first host target For Curation next + PTI inducer Flg22
#60 opened Dec 9, 2019 by CuzickA
10
PMID: 20624958 A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens. effector For Curation inverse gene for gene necrotroph
#59 opened Dec 9, 2019 by CuzickA
@ValWood
7
Implement a system to formalise curation checking by nominated individuals Future
#56 opened Dec 4, 2019 by CuzickA
3
Obsolete UniProt identifiers in existing PHI-base curation PHI4 to PHI5 data migration
#52 opened Nov 4, 2019 by jseager7
@jseager7
5
List of papers that may be too tricky to curate in PHI-Canto
#32 opened Aug 2, 2019 by CuzickA
1
PMID:26822079 A Phytophthora infestans RXLR effector targets plant PP1c isoforms that promote late blight disease. effector first host target For Curation next
#21 opened Apr 24, 2019 by CuzickA
8
how to capture small RNA in PHI-Canto? Future PHI-Canto
#11 opened Sep 24, 2018 by CuzickA
4
how to handle gene cluster deletion in PHI-Canto? PHI-Canto
#10 opened Sep 21, 2018 by CuzickA
@CuzickA
5
specifying different "types" of knockdown Future PHI-Canto
#3 opened Dec 18, 2017 by ValWood
3
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