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Examples of when it is not possible to curate metagenotype controls #96

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CuzickA opened this issue Mar 8, 2021 · 1 comment
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@CuzickA
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CuzickA commented Mar 8, 2021

  1. PMID:32883427 Functional evaluation of a homologue of plant rapid alkalinisation factor (RALF) peptides in Fusarium graminearum #89
    image

also seen in paper #66

  1. PMID: 31076860 A LysM effector protein from the basidiomycete Rhizoctonia solani contributes to virulence through suppression of chitin-triggered immunity. #44
    Can't curate controls as WT pathogen gene (delivered by infiltration or heterologous organism) on WT host with no specified gene
    The control for the ROS annotation (decreased level of pathogen-induced host reactive oxygen species) would be host only WT no specified gene +PTI = ROS present and we currently can't curate host genotype no specified gene.
    image
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