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Update develop-ref after #2672 and #2675 #2676

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merged 909 commits into from
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Commits on Mar 23, 2023

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Commits on Mar 30, 2023

  1. #2493 updates lat/lon/elv if SiteName is changed

    Howard Soh committed Mar 30, 2023
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  2. Merge pull request #2495 from dtcenter/bugfix_2493_dev_aeronet3_lat_l…

    …on_elv
    
    #2493 updates lat/lon/elv if SiteName is changed
    hsoh-u authored Mar 30, 2023
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Commits on Mar 31, 2023

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Commits on Apr 3, 2023

  1. Feature 2460 dropdown menu appendix a (#2501)

    * testing dropdown menu
    
    * testing dropdown menu take 2
    
    * testing dropdown menu take 3 no header
    
    * testing dropdown menu take 4
    
    * testing dropdown menu take 5
    
    * testing dropdown menu take 6
    
    * File IO section
    
    * File IO section updates
    
    * adding dropdowns BEFORE pcp-combine
    
    * adding dropdowns BEFORE tc-stat
    
    * adding dropdowns BEFORE utilities
    
    * first pass at all dropdowns
    
    * adding some more dropdowns.  Making sure the new spacing is under 79 characters per line.  Exceptions to this include, code blocks, web addresses or headers
    
    * Update docs/Users_Guide/appendixA.rst
    
    Co-authored-by: jprestop <[email protected]>
    
    * Update docs/Users_Guide/appendixA.rst
    
    Co-authored-by: jprestop <[email protected]>
    
    * Update docs/Users_Guide/appendixA.rst
    
    Co-authored-by: jprestop <[email protected]>
    
    * changed all references of BUFRLIB_v10.2.3 to BUFRLIB_v11.3.0.
    
    * Removed the line    Are you using NetCDF version 3.4 or version 4? Currently, only NetCDF version 3.6 can be used with MET.   because that is not true.
    
    * adding troubleshooting dropdowns
    
    * 79 character limit per line
    
    * removing 31.3 & 31.4 dropdown menus
    
    ---------
    
    Co-authored-by: jprestop <[email protected]>
    lisagoodrich and jprestop authored Apr 3, 2023
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  4. #2285 Merged from met_point_obs_nc.py

    Howard Soh committed Apr 3, 2023
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  5. #2285 Initial release

    Howard Soh committed Apr 3, 2023
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  6. #2285 Initial release

    Howard Soh committed Apr 3, 2023
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  7. #2285 Moved read_met_point_obs.py Initial release

    Howard Soh committed Apr 3, 2023
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Commits on Apr 4, 2023

  1. #2285 Restructure python scripts

    Howard Soh committed Apr 4, 2023
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Commits on Apr 6, 2023

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Commits on Apr 7, 2023

  1. #2285 Initial release

    Howard Soh committed Apr 7, 2023
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  2. #2285 Initial release

    Howard Soh committed Apr 7, 2023
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  3. #2285 Restructure python scripts

    Howard Soh committed Apr 7, 2023
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  4. #2285 Restructure python scripts

    Howard Soh committed Apr 7, 2023
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  5. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  6. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  7. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  8. #2285 Removed xarray and added MaskFilters

    Howard Soh committed Apr 7, 2023
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  9. #2285 Uses MaskFilters

    Howard Soh committed Apr 7, 2023
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  10. #2285 Removed xarry

    Howard Soh committed Apr 7, 2023
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  11. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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  12. #2285 Adjusted the path for python scripts

    Howard Soh committed Apr 7, 2023
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Commits on Apr 10, 2023

  1. #2285 Imnport importlib.util instead of importlib

    Howard Soh committed Apr 10, 2023
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  2. #2285 Change back

    Howard Soh committed Apr 10, 2023
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  3. #2285 Changed importing importlib

    Howard Soh committed Apr 10, 2023
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  4. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 10, 2023
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  5. #2285 Merged scripts/python/met_point_obs_nc.py to scripts/python/met…

    …/point.py
    Howard Soh committed Apr 10, 2023
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Commits on Apr 11, 2023

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  8. Fixes table references and also adds note about assumed path location…

    … and corrects some paths that used MET_BASE.
    DanielAdriaansen committed Apr 11, 2023
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Commits on Apr 13, 2023

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  3. #2285 Changed spaces for indent (4 to 3)

    Howard Soh committed Apr 13, 2023
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  4. #2285 Renamed load_txt to read_2d_text_input. Removed get_grid_metada…

    …ta and added create_header_attrs
    Howard Soh committed Apr 13, 2023
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  5. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 13, 2023
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Commits on Apr 14, 2023

  1. #2474 Avoid the devision by 0

    Howard Soh committed Apr 14, 2023
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  2. #2474 Check if n_alloc is a negative value

    Howard Soh committed Apr 14, 2023
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  3. @2474 Check if E is not allocated before accessing it

    Howard Soh committed Apr 14, 2023
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  5. #2474 Initialize n to 0

    Howard Soh committed Apr 14, 2023
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  10. #2474 renamed create_header_attrs to set_dataplane_attrs

    Howard Soh committed Apr 14, 2023
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  12. #2474 Corrected API name, get_sample_point_obs

    Howard Soh committed Apr 14, 2023
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  13. #2474 Formating (intend)

    Howard Soh committed Apr 14, 2023
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  14. @2474 Updated comments

    Howard Soh committed Apr 14, 2023
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  15. #2474 Removed the convertion option

    Howard Soh committed Apr 14, 2023
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  16. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 14, 2023
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  17. Cleans up code-block formatting and adds captions to relevant code bl…

    …ocks that might be nice to link to since with a caption, the code block has a copyable link to share.
    DanielAdriaansen committed Apr 14, 2023
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  21. Corrects RST error.

    DanielAdriaansen committed Apr 14, 2023
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  22. RST link errors.

    DanielAdriaansen committed Apr 14, 2023
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  23. @2474 Changed long pointer to LongArray

    Howard Soh committed Apr 14, 2023
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  24. #2474 Use LongArray for NetCDF API

    Howard Soh committed Apr 14, 2023
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  25. #2474 Formating (intend), Moved convert_point_data to under met_point…

    …_tools
    Howard Soh committed Apr 14, 2023
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  26. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    Howard Soh committed Apr 14, 2023
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  27. #2474 Formating (intend), Moved convert_point_data to under met_point…

    …_tools
    Howard Soh committed Apr 14, 2023
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  28. #2474 Changed 0 to nullptr

    Howard Soh committed Apr 14, 2023
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Commits on Apr 15, 2023

  1. #2474 Assign FO_Node instead of calling memcpy

    Howard Soh committed Apr 15, 2023
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Commits on Apr 17, 2023

  1. #2285 Check and give wwarning if met_point_data or point_data is miss…

    …ing from python script.
    Howard Soh committed Apr 17, 2023
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  4. Removes examples for MPR/StatAnalysis since it's really just command …

    …line only and no config file is involved.
    DanielAdriaansen committed Apr 17, 2023
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  7. Update docs/Users_Guide/appendixF.rst

    Co-authored-by: jprestop <[email protected]>
    DanielAdriaansen and jprestop authored Apr 17, 2023
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  8. Update docs/Users_Guide/appendixF.rst

    Co-authored-by: jprestop <[email protected]>
    DanielAdriaansen and jprestop authored Apr 17, 2023
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  10. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    DanielAdriaansen committed Apr 17, 2023
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Commits on Apr 18, 2023

  1. Merge pull request #2512 from dtcenter/feature_2474_sonarqube_finding…

    …s_ncutil
    
    Feature 2474 sonarqube findings ncutil
    hsoh-u authored Apr 18, 2023
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  2. Update appendixF.rst

    Fixes typo in Appendix F.
    DanielAdriaansen authored Apr 18, 2023
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Commits on Apr 19, 2023

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  2. Merge branch 'feature_2285_read_point_data' of github.com:dtcenter/ME…

    …T into feature_2285_read_point_data
    DanielAdriaansen committed Apr 19, 2023
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  4. #2474 Check the offset

    Howard Soh committed Apr 19, 2023
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Commits on Apr 20, 2023

  1. Merge pull request #2509 from dtcenter/feature_2285_read_point_data

    Feature 2285 read point data
    hsoh-u authored Apr 20, 2023
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  2. #2474 cleanup

    Howard Soh committed Apr 20, 2023
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  3. #2474 Added comment

    Howard Soh committed Apr 20, 2023
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  4. Merge pull request #2515 from dtcenter/feature_2474_sonarqube_finding…

    …s_vector
    
    Feature 2474 sonarqube findings at MTD
    hsoh-u authored Apr 20, 2023
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Commits on Apr 21, 2023

  1. Hotfix to the develop branch to fix the formatting of two Debug(0) me…

    …ssages. But Debug(0) is printed as Warning. Switching to Debug(1) instead.
    JohnHalleyGotway committed Apr 21, 2023
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Commits on Apr 23, 2023

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Commits on Apr 26, 2023

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  2. Revert "#2521 Changed a double pointer to DoubleArray for SonarQube"

    This reverts commit 801e485.
    Howard Soh committed Apr 26, 2023
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  3. #2521 Changed module() to get_module() because module becomes a keywo…

    …rd since C++20
    Howard Soh committed Apr 26, 2023
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  4. #2521 Added data_len argument to get_filtered_nc_data_2d

    Howard Soh committed Apr 26, 2023
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  5. Checks if Nelements is a negative value

    Howard Soh committed Apr 26, 2023
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  6. #2521 Checks the boundary.

    Howard Soh committed Apr 26, 2023
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Commits on Apr 27, 2023

  1. Corrected hdr_cnt from python embedding

    Howard Soh committed Apr 27, 2023
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  2. Rollback

    Howard Soh committed Apr 27, 2023
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  4. #2525 Use -9999. as a missing value

    Howard Soh committed Apr 27, 2023
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  5. #2525 Removed a log message

    Howard Soh committed Apr 27, 2023
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Commits on Apr 28, 2023

  1. Merge pull request #2529 from dtcenter/bugfix_2525_nhdr_1_off

    Bugfix #2525 nhdr 1 off
    hsoh-u authored Apr 28, 2023
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  3. Feature develop cycle change (#2528)

    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * change PROJECT ASSIGNMENT to CYCLE ASSIGNMENT
    
    * Added paths to ignore
    
    * Added addt'l paths to ignore, specific to METplus
    
    * Added return that I inadvertently removed
    
    * Removed path added to wrong file
    
    ---------
    
    Co-authored-by: jprestop <[email protected]>
    lisagoodrich and jprestop authored Apr 28, 2023
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Commits on May 3, 2023

  1. Merge pull request #2526 from dtcenter/feature_2521_sonarqube_finding…

    …s_mtd
    
    Feature 2521 sonarqube findings mtd and madis2nc
    hsoh-u authored May 3, 2023
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Commits on May 4, 2023

  1. Update .readthedocs.yaml

    Modifying the structure of the Python version and updating to Python 3.10 to resolve the Import and Extension errors related to urllib3 in ReadTheDocs builds
    jprestop authored May 4, 2023
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Commits on May 5, 2023

  1. Bugfix 2531 compilation errors (#2533)

    * Resolve error: more than one instance of overloaded function isnan matches the argument list
    
    * Ensure RTD build passes
    
    * Added std:: in front of isnan for compilation on Hera
    
    * Add -std=c++11 to CXXFLAGS
    
    * Added note about C++11
    jprestop authored May 5, 2023
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Commits on May 8, 2023

  1. Update release-notes.rst

    jprestop authored May 8, 2023
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  2. Fix formatting

    jprestop authored May 8, 2023
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  3. Fix formatting problem

    jprestop authored May 8, 2023
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Commits on May 9, 2023

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Commits on May 10, 2023

  1. #2521 Move down using statement after include

    Howard Soh committed May 10, 2023
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  2. #2521 Remove these useless parentheses

    Howard Soh committed May 10, 2023
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  3. #2521 Move #include statement to the top of the file

    Howard Soh committed May 10, 2023
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  4. #2521 Move #include statement to the top of the file and removed thes…

    …e useless parentheses
    Howard Soh committed May 10, 2023
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  5. #2521 Move #include statement to the top of the file and removed thes…

    …e useless parentheses. used nullptr
    Howard Soh committed May 10, 2023
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  6. #2521 Used nullptr

    Howard Soh committed May 10, 2023
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  7. #2521 Move #include statement to the top of the file

    Howard Soh committed May 10, 2023
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  8. #2521 Appended name space std to ostream

    Howard Soh committed May 10, 2023
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  9. #2521 Appended the namespace std to ostream

    Howard Soh committed May 10, 2023
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  10. #2521 defined int j out of for loop)

    Howard Soh committed May 10, 2023
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  12. Feature #2425 tc_stat_rirw (#2536)

    Co-authored-by: Seth Linden <[email protected]>
    Co-authored-by: John Halley Gotway <[email protected]>
    3 people authored May 10, 2023
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  13. Feature #1060 shapes (#2537)

    Co-authored-by: Daniel Adriaansen <[email protected]>
    JohnHalleyGotway and DanielAdriaansen authored May 10, 2023
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Commits on May 11, 2023

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  3. Update update_truth.yml

    Name this workflow the same as its named in the dtcenter/METplus repository.
    JohnHalleyGotway authored May 11, 2023
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  4. #2521 Added asignment operator with noexcept keyword

    Howard Soh committed May 11, 2023
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  9. #2521 Added asignment operator with noexcept keyword to ConvData and …

    …RadData
    Howard Soh committed May 11, 2023
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Commits on May 15, 2023

  1. Per #2542 develop gheidke (#2543)

    * Per #2542, in the ContingencyTable class, update gheidke(), gheidke_ec(), gkuiper(), and gerrity() to return bad data for empty contingency tables rather than erroring out.
    
    * Per #2542, modify TC-Stat config file job number 8 that was added for #2425 by adding the  option. That produces output for both the AHWI and BCLP model names. The BCLP contingency table is empty which triggers this runtime error. Tweaking this newly added tests and confirming that it now runs without error demonstrate the fix.
    JohnHalleyGotway authored May 15, 2023
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Commits on May 18, 2023

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  2. #2521 Refactoring to reduce the depth of if/for

    Howard Soh committed May 18, 2023
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  3. #2521 Refactoring to reduce the depth of if/for

    Howard Soh committed May 18, 2023
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  4. #5221 Changed strtok to strtok_r

    Howard Soh committed May 18, 2023
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Commits on May 22, 2023

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Commits on May 24, 2023

  1. Feature 2540 2485 compilation (#2548)

    * Per 2540, added library name prefixes to log file names
    
    * Per #2485, allow user to specify compiler name/version and python name/version modules to load
    
    * Fix equality statement
    
    * Added more documentation at the top
    jprestop authored May 24, 2023
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Commits on May 25, 2023

  1. Update appendixC.rst

    Updated HSS and HSS_EC definitions with CPC input
    j-opatz authored May 25, 2023
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Commits on Jun 6, 2023

  1. #2525 Keep the embedded name to pyembed_name

    Howard Soh committed Jun 6, 2023
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  2. #2525 Corrected typo

    Howard Soh committed Jun 6, 2023
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  3. #2525 Added logger,py

    Howard Soh committed Jun 6, 2023
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  4. #2525 Added logger,py

    Howard Soh committed Jun 6, 2023
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  5. #2525 Call the wrapper which validates the MET data

    Howard Soh committed Jun 6, 2023
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  6. #2525 Added validate_met_data and drived from logger.

    Howard Soh committed Jun 6, 2023
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Commits on Jun 7, 2023

  1. #2521 Cast to char

    Howard Soh committed Jun 7, 2023
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  2. #2521Added explicit to construcore

    Howard Soh committed Jun 7, 2023
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  3. #2521Added explicit to construcore

    Howard Soh committed Jun 7, 2023
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  4. #2521 USe nullptr instead of 0

    Howard Soh committed Jun 7, 2023
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  5. #2521 Added explicit to non default constructor

    Howard Soh committed Jun 7, 2023
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  6. #2521 Release allocated memory

    Howard Soh committed Jun 7, 2023
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  7. #2521 applied constexpr

    Howard Soh committed Jun 7, 2023
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  8. #2521 Excluded three vaiables which are declared at basic/vx_cal/unix…

    …_to_mdyhms.cc
    Howard Soh committed Jun 7, 2023
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  9. #2521 Applied explicit & virtual

    Howard Soh committed Jun 7, 2023
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  10. #2521 Fixed code smells

    Howard Soh committed Jun 7, 2023
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  11. Merge remote-tracking branch 'origin/develop' into feature_2521_sonar…

    …qube_code_smell
    Howard Soh committed Jun 7, 2023
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Commits on Jun 9, 2023

  1. Feature #2552 gtwo (#2553)

    Co-authored-by: John and Cindy <[email protected]>
    JohnHalleyGotway and John and Cindy authored Jun 9, 2023
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Commits on Jun 12, 2023

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  2. Removed min_value/max_value

    Howard Soh committed Jun 12, 2023
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  5. #2525 Removed min_value/max_value

    Howard Soh committed Jun 12, 2023
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  6. Merge branch 'feature_2525_fill_value_at_dataplane' of github.com:dtc…

    …enter/MET into feature_2525_fill_value_at_dataplane
    Howard Soh committed Jun 12, 2023
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  7. Feature #1693 equal_area (#2567)

    Co-authored-by: rgbullock <[email protected]>
    Co-authored-by: Randy Bullock <[email protected]>
    3 people authored Jun 12, 2023
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  8. #2521 Rolback read_bufr_vars

    Howard Soh committed Jun 12, 2023
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Commits on Jun 13, 2023

  1. #2525 FIlter out None value to NetCDF attribute

    Howard Soh committed Jun 13, 2023
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  4. #2525 Cleanup and updated log messages

    Howard Soh committed Jun 13, 2023
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  8. Extra colon.

    DanielAdriaansen committed Jun 13, 2023
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  10. Merge pull request #2557 from dtcenter/feature_2525_fill_value_at_dat…

    …aplane
    
    Feature #2525 fill value at dataplane
    hsoh-u authored Jun 13, 2023
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  11. #2521 Corrected nearest day at adjuste_day_for_month_year_units. Upda…

    …ted the log messages
    Howard Soh committed Jun 13, 2023
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  12. Merge branch 'feature_2521_sonarqube_code_smell' of github.com:dtcent…

    …er/MET into feature_2521_sonarqube_code_smell
    Howard Soh committed Jun 13, 2023
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  14. #2521 Added namespace std to ofstream

    Howard Soh committed Jun 13, 2023
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  15. #2521 Added std namespace

    Howard Soh committed Jun 13, 2023
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Commits on Jun 14, 2023

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  2. #2521 Put old code back at add_to_unixtime

    Howard Soh committed Jun 14, 2023
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  3. Merge pull request #2570 from dtcenter/feature_2521_sonarqube_code_smell

    Feature #2521 sonarqube code smell
    hsoh-u authored Jun 14, 2023
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Commits on Jun 15, 2023

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Commits on Jun 16, 2023

  1. Feature #1283 mvmode mods (#2569)

    Co-authored-by: John Halley Gotway <[email protected]>
    Co-authored-by: Dave Albo <[email protected]>
    3 people authored Jun 16, 2023
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Commits on Jun 19, 2023

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Commits on Jun 21, 2023

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Commits on Jul 7, 2023

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Commits on Aug 1, 2023

  1. Merge latest development from main_v11.1 into develop (#2623)

    Co-authored-by: John Halley Gotway <[email protected]>
    Co-authored-by: Seth Linden <[email protected]>
    Co-authored-by: jprestop <[email protected]>
    Co-authored-by: Daniel Adriaansen <[email protected]>
    Co-authored-by: John and Cindy <[email protected]>
    Co-authored-by: Howard Soh <[email protected]>
    Co-authored-by: George McCabe <[email protected]>
    Co-authored-by: hsoh-u <[email protected]>
    Co-authored-by: MET Tools Test Account <[email protected]>
    Co-authored-by: Seth Linden <[email protected]>
    Co-authored-by: lisagoodrich <[email protected]>
    Co-authored-by: davidalbo <[email protected]>
    Co-authored-by: Lisa Goodrich <[email protected]>
    Co-authored-by: metplus-bot <[email protected]>
    Co-authored-by: j-opatz <[email protected]>
    Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
    Co-authored-by: Jonathan Vigh <[email protected]>
    Co-authored-by: Tracy Hertneky <[email protected]>
    Co-authored-by: David Albo <[email protected]>
    Co-authored-by: Dan Adriaansen <[email protected]>
    Fix Python environment issue (#2407)
    fix definitions of G172 and G220 based on comments in NOAA-EMC/NCEPLIBS-w3emc#157. (#2406)
    fix #2380 develop override (#2382)
    fix #2408 develop empty config (#2410)
    fix #2390 develop compile zlib (#2404)
    fix #2412 develop climo (#2422)
    fix #2437 develop convert (#2439)
    fix for develop, for #2437, forgot one reference to the search_parent for a dictionary lookup.
    fix #2452 develop airnow (#2454)
    fix #2449 develop pdf (#2464)
    fix #2402 develop sonarqube (#2468)
    fix #2426 develop buoy (#2475)
    fix 2518 dtypes appf docs (#2519)
    fix 2531 compilation errors (#2533)
    fix #2531 compilation_errors_configure (#2535)
    fix 2596 main v11.1 rpath compilation (#2614)
    fix #2514 main_v11.1 clang (#2628)
    JohnHalleyGotway authored Aug 1, 2023
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Commits on Aug 14, 2023

  1. Remove NPO and SPO from appendixB.rst

    The NPO and SPO polylines were removed in MET version 6.1 since they both contain holes. NPO contains the Aleutian Islands and SPO contains Hawaii. The polyline format does not support shapes with holes in them.
    JohnHalleyGotway authored Aug 14, 2023
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Commits on Aug 16, 2023

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Commits on Aug 21, 2023

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Commits on Aug 22, 2023

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Commits on Aug 23, 2023

  1. Feature 2643 generic install (#2657)

    * Updates before testing
    
    * Updated to work with compile_met_all.sh script
    
    * Updated to be 12.0.0 since this is in develop
    
    * corrected spelling
    
    * Updated instructions, changed tense of wording
    
    * Adding period
    
    * Reword information about the external libraries
    
    ---------
    
    Co-authored-by: j-opatz <[email protected]>
    jprestop and j-opatz authored Aug 23, 2023
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Commits on Aug 24, 2023

  1. #2650 Changed the hotsname to needham and token to login

    Howard Soh committed Aug 24, 2023
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  2. Merge pull request #2670 from dtcenter/feature_2650_sonarqube_server_…

    …needham
    
    #2650 Changed the hotsname to needham and token to login
    hsoh-u authored Aug 24, 2023
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Commits on Aug 31, 2023

  1. #2640 Added nlocs to metadata_map

    Howard Soh committed Aug 31, 2023
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  2. #2640 Changed 0 to nullptr

    Howard Soh committed Aug 31, 2023
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  3. #2640 Added namespace for map

    Howard Soh committed Aug 31, 2023
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  4. #2640 Added is_in_metadata_map and get the dimension name or veriable…

    … name from the metadata_map
    Howard Soh committed Aug 31, 2023
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  5. #2640 Corrected lat/lon variable names

    Howard Soh committed Aug 31, 2023
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Commits on Sep 1, 2023

  1. #2640 Do not initialize metadata_name at find_meta_name

    Howard Soh committed Sep 1, 2023
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Commits on Sep 5, 2023

  1. Merge pull request #2674 from dtcenter/feature_2640_ioda2nc_dimension

    Feature 2640 ioda2nc dimension
    hsoh-u authored Sep 5, 2023
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Commits on Sep 6, 2023

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