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Update develop-ref after #2454 #2457
Commits on Aug 11, 2022
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Commits on Aug 13, 2022
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Commits on Aug 15, 2022
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Documentation-only commit directly to develop to correct a typo. The …
…default dotsize if 1.0 rather than 10.
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Commits on Aug 16, 2022
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Commits on Aug 18, 2022
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Feature 2055 nbm grib2 update (#2234)
* Per issue #2055, in read_grib2_record_list() added new PDS numbers 6, 10, 15 (for NBM data). SL * Per issue #2055: in read_grib2_record_list(), in section that validates PDS number changed, for undefined PDS numbers, changed Error to Warning and continue (instead of exit). SL * Per issue #2055, created new entries for NBM grib2 data fields. SL * Per issue #2055. Added more NBM fields based on a 12z, f003 file. SL * Per issue #2055, after interogating several NBM lead-time files, added TMAX field. SL * Per issue #2055, added grib2_nbm.txt to the list. SL * Per #2055, update the grib2_nbm.txt file entries in the table_files Makefiles. * Per issue #2055, fixed syntax entry for TSTM field. SL * Per issue #2055, fixed a few more syntax errors for some of the fields. SL * Per issue #2055, in read_grib2_record_list(), added section to set level values for template number 6 (NBM data). Also added some temporary print statements. SL * Per issue #2055, in read_grib2_record_list(), added code to set levels for table number 10 (like 6). SL * Per #2055, adding support for new GRIB2_perc_val configuration option to filter records based on the forecast percentile value used by GRIB2 product definition templates 6 and 10. Seth, note that I also included the probability filtering logic tweak we discussed, since it was already present in that same file. * Per issue #2055: in find_record_matches(), in section that resolves Prob fields, changed 'break' to 'continue' for non Probs. SL * Per issue #2055, in read_grib2_record_list() cleaned up some commented out code. SL * Per issue #2055, in read_grib2_record_list() cleaned up all print statements. SL * Per issue #2055, added 5 new unit tests for NBM data. SL * Update data2d_grib2.cc * Update data2d_grib2.cc Co-authored-by: Seth Linden <[email protected]> Co-authored-by: John Halley Gotway <[email protected]>
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Merge pull request #2233 from dtcenter/feature_2225_level_string_with_at
feature_2225_level_string_with_at
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Commits on Aug 19, 2022
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Commits on Aug 26, 2022
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Commits on Aug 29, 2022
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Commits on Aug 30, 2022
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Hotfix to the develop branch to fix typos in the names of 3 tools (gr…
…id_stat, gribtab_dat_to_flat, and gsidens2orank). Also removed commented out code from main.cc.
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Commits on Sep 1, 2022
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Commits on Sep 2, 2022
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* Per #2198, adding Seth Linden and Dave Albo to the Author List * Per #2198, updated Dave Albo to David Albo * Per #2198, added three new authors based on submitted AMS abstract * Per #2198, adding .zenodo.json file * Per #2198, adding orcids for all based on Tatiana's suggestion * Update .zenodo.json Co-authored-by: johnhg <[email protected]> * Update .zenodo.json Co-authored-by: johnhg <[email protected]> * Update .zenodo.json Co-authored-by: johnhg <[email protected]> Co-authored-by: johnhg <[email protected]>
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Commits on Sep 6, 2022
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Commits on Sep 8, 2022
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Feature 2196 update dockerfile (#2249)
* Per #2196, update for upgrade to Python 3.8.6 * Updated based on new structure of METbaseimage * Changed MET_BASE_IMAGE references to MET_BASE_TAG; Added information to the README.md file * Changed MET_BASE_IMAGE references to MET_BASE_TAG; Updated the version from v1.0 to v1.1 * Update internal/scripts/docker/README.md Based on suggestion from John HG. Co-authored-by: johnhg <[email protected]> * Update internal/scripts/docker/README.md Based on suggestion from John HG. Co-authored-by: johnhg <[email protected]> * Update internal/scripts/docker/README.md Based on suggestion from John HG. Co-authored-by: johnhg <[email protected]> * Update internal/scripts/docker/README.md Based on suggestion from John HG. Co-authored-by: johnhg <[email protected]> * Per #2196, updating README.md based on suggestions from John HG Co-authored-by: johnhg <[email protected]>
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Commits on Sep 9, 2022
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Feature 1774 contrib outline (#2253)
* creating chapter files * putting a space in to work through the git add and commit process. * Changed formatting of one header Co-authored-by: Lisa Goodrich <[email protected]> Co-authored-by: jprestop <[email protected]>
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Commits on Sep 13, 2022
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Feature 2206 fair crps to ecnt (#2247)
* Per issue #2206, for the ECNT line type, added CRPS_EMP_FAIR. SL * Per issue #2206, for ECNT line type, added CRPS_EMP_FAIR. SL * Per issue #2206, for ecnt_columns, added CRPS_EMP_FAIR. SL * Per issue #2206, in write_ecnt_cols(), added crps_emp_fair. SL * Per issue #2206, in ECNTInfo, added crps_emp_fair. SL * Per issue #2206, started stubbing code pieced to calculate crps_emp_fair. SL * Per issue #2206, added new function mean_abs_diff(). SL * Per issue #2206, in compute_pair_vals() updated the code to calculate crps_emp and crps_emp_fair. SL * Per issue #2206, added crps_emp_fair (CRPS_EMP_FAIR) to relevant code pieces. SL * Per issue #2206, added wording for CRPS_EMP_FAIR, also added it to last column of ECNT line type. SL * Per issue #2206, added info for CRPS_EMP_FAIR and also added the math equation for this. SL * Per issue #2206, update the math equation for CRPS_EMP_FAIR. SL * Per issue #2206, added new function weighted_mean_absolute_diff(). SL * Per issue #2206, updated the crps_emp_fair calculation to subtract the weighted_mean_abs_diff. SL * Per issue #2206, in aggr_orank_lines(), updated calculation for crps_emp_fair to use weighted_mean_abs_diff. SL * Per issue #2206, renamed weighted_mean_abs_diff() to wmean_abs_diff(). SL * Per issue #2206, for the crps_emp_fair calculation, changed weighted_mean_abs_diff() to wmean_abs_diff(). SL * Per issue #2206, in aggr_orank_lines(), for the crps_emp_fair calculation, changed weighted_mean_abs_diff() to wmean_abs_diff(). SL * Per issue #2206, updated the math equation for the CRPS_EMP_FAIR calculation. SL * Per issue #2206, fixed a bug in the wmean_abs_diff() function. SL * Per issue #2206, added code for crps_emp_fair. SL * Per issue #2206, in set() function, added checks for crps_emp and crps_emp_fair, for values of 0.0. SL Co-authored-by: Seth Linden <[email protected]>
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automated tests: added ability to trigger build of develop-lite docke…
…r image that it used in the METplus automated tests
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to fix issues with python embedding when the path changes, update dev…
…elopment.docker file (apparently unused or rarely previously) to include changes for Python 3.8 including setting the LDFLAG to include -rpath to prevent needing LD_LIBRARY_PATH set to run the tools. Source the env file in the build MET docker script instead of setting the env vars in the configure command
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Commits on Sep 14, 2022
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Hotfix to the develop branch to revert the python version from 3.8 ba…
…ck to 3.6. This is done by rolling back the base image in the MET Dockerfiles to dtcenter/met-base:v1.0. Using 3.8 caused the downstream METplus python embedding examples to fail via GHA in the METplus repo. Will write up an issue to investigate more during the MET-11.0.0-beta4 development cycle.
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Tweak the build_docker_image.sh script by removing references to MET_…
…BASE_IMAGE and MET_BASE_TAG since those variables are hard-coded in the Dockerfiles themselves and this script includes no logic to handle them.
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Revert "Tweak the build_docker_image.sh script by removing references…
… to MET_BASE_IMAGE and MET_BASE_TAG since those variables are hard-coded in the Dockerfiles themselves and this script includes no logic to handle them." This reverts commit 5efc65e.
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Hotfix, found 2 more spots where I needed to change v1.1 to v1.0. We …
…should really revisit having this setting spread across so many locations.
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Bugfix 2238 link error (#2255)
Co-authored-by: Howard Soh <[email protected]>
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Feature dtcenter/METplus-Internal#15 add checksum to release (#2254)
Co-authored-by: jprestop <[email protected]> Co-authored-by: John Halley Gotway <[email protected]>
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Commits on Sep 15, 2022
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feature 2216 ioda2nc station_id (#2259)
Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]>
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Commits on Sep 16, 2022
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Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: MET Tools Test Account <[email protected]>
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Commits on Sep 18, 2022
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Feature 2142 ascii2nc airnow (#2256)
Co-authored-by: Dave Albo <[email protected]> Co-authored-by: John Halley Gotway <[email protected]>
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Feature 1954 semilatlon (#2262)
Co-authored-by: j-opatz <[email protected]>
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Commits on Sep 19, 2022
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Removed future imports since they were used to transition from python…
… 2 to 3. Rearranged logic to be more readible by checking error conditions and exiting if they are not met instead of putting all of the logic to run inside the if statement
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Commits on Sep 21, 2022
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Commits on Sep 26, 2022
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Minor hotfix for the develop branch. Running bootstrap for develop on…
… seneca changes the order of vx_grid semilatlon slightly. We probably manually editted that file instead of running bootstrap to regenerate it.
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Commits on Sep 28, 2022
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Bugfix #2271 develop nbrctc (#2272)
Co-authored-by: George McCabe <[email protected]>
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Commits on Sep 29, 2022
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#2270 Removed version number for SonrQube scanner pathdiff
Howard Soh committedSep 29, 2022 Configuration menu - View commit details
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Commits on Sep 30, 2022
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Merge pull request #2287 from dtcenter/feature_2270_new_sonarqube
Feature #2270 new_sonarqube
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Commits on Oct 4, 2022
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Feature 2227 namespace (#2290)
* Per #2227 changes in this commit resolve all errors from removing 'using namespace std' from all header files in the src/basic directory * Attempt to resolve errors in GitHub actions from removing 'using namepsace std' from all src/basic/ libraries, plus removal from src/libcode/vx_gnomon/gnomon.h and src/libcode/vx_nc_util/nc_utils.h * Attempt to fix GHA errors with compilation after removal of 'using namespace std'; locally compiles fine * Per #2227, attempting to fix GHA compilation; Compiltion on seneca works fine * Per #2227, attempt to resolve GHA compilation issues; seneca compilation works fine * Per #2227, attempt to resolve GHA compilation issues; seneca compilation works fine * Per #2227, removing namespace from vx_series_data library * Per #2227, removing namespace std from vx_shapedata library * Per #2227, removing namespace std from vx_data2d_grib2 and vx_data2d_grib libraries * Per #2227, removing namespace std from vx_statistics library * Per #2227, removing namespace std from src/tools/tc_utils * Per #2227, removed namespace std from /src/tools/core header files * Per #2227, clean up and continued work * Per #2227, changes to remove namespace std and netCDF from header files * Per #2227, resolve errors in GitHub Actions build * Per #2227, resolve new errors in GitHub Actions build * Per #2227, resolve new errors in GitHub Actions build * Per #2227, resolve new errors in GitHub Actions build * Per #2227, realign variables * Per #2227, updating comment * Per #2227, updating comment * Per #2227, realign variables * Per #2227, realign variables * Per #2227, realign variables * Per #2227, updating comment * Update src/basic/vx_config/config.tab.cc Co-authored-by: johnhg <[email protected]> Co-authored-by: Julie Prestopnik <[email protected]> Co-authored-by: johnhg <[email protected]>
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Commits on Oct 5, 2022
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Commits on Oct 12, 2022
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Changes for #2297 included a small typo that I'm fixing directly in the develop branch.
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Feature #2297 hotfix to develop
A final hotfix to the develop branch to get the build_docker_trigger_metplus.yml workflow working again. I tested on feature_2297_gha branch to confirm that no double-quotes are actually needed.
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Commits on Oct 16, 2022
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Co-authored-by: Julie Prestopnik <[email protected]>
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Feature 2036 enhance tc pairs (#2301)
Co-authored-by: Seth Linden <[email protected]> Co-authored-by: John Halley Gotway <[email protected]>
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Commits on Oct 18, 2022
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Merge pull request #2264 from dtcenter/feature_cleanup_py
Clean up Python Embedding scripts
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Feature 2276 enhance ascii2nc to read ndbc buoy data (#2294)
Co-authored-by: Dave Albo <[email protected]> Co-authored-by: MET Tools Test Account <[email protected]>
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Feature 2155 time units months and years (#2300)
Co-authored-by: Howard Soh <[email protected]>
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Commits on Oct 19, 2022
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removing release-notes out of overview and creating a seperate chapte…
…r for this information. (#2304)
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Commits on Oct 25, 2022
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Bugfix #2306 ascii2nc airnow hourly (#2314)
Co-authored-by: Dave Albo <[email protected]>
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Commits on Oct 28, 2022
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Feature 2232 refine grid diag (#2316)
Co-authored-by: Seth Linden <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: MET Tools Test Account <[email protected]>
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Commits on Oct 30, 2022
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Feature #2068 ioda2nc v2.0 (#2307)
Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: MET Tools Test Account <[email protected]>
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Commits on Oct 31, 2022
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Commits on Nov 2, 2022
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Hotfix to the develop branch to correct the column numbers in the CNT…
… line type table for the RMSOA, ANOM_CORR_UNCNTR, and SI statistics.
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Commits on Nov 3, 2022
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Commits on Nov 4, 2022
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2285 Removed execuable permission to data files
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Commits on Nov 5, 2022
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Howard Soh committed
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Howard Soh committed
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Commits on Nov 8, 2022
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Commits on Nov 9, 2022
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#2285 The class met_point_obs is renamed to base_met_point_obs. csv_m…
…et_point_obs and met_point_obs are derived from base_met_point_obs. Added convert_point_data
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#2285 generated met_point_data by calling convert_point_data
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#2085 Added skip-header option
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#1943 Added seeps to output_flag
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#1943 Added conf_key_seeps_flag
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#1943 Changed argument type PairDataPoint to SeepsAggScore
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#1943 Added compute_seeps_density_vector and compute_aggregated_seeps…
…_grid
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Feature #2206 fix_spread_md (#2335)
Co-authored-by: Seth Linden <[email protected]>
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Per #2339, first step... enhance Stat-Analysis to parse the SEEPS and…
… SEEPS_MPR lines types.
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Per #2339, update stat_analysis to make -job filter -line_type SEEPS …
…or SEEPS_MPR run without error.
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#2285 Modified python_plot_point_obs_CONFIG_XXX to python_plot_point_…
…obs_with_point_data
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#1943 DSave SEEPS_MPR score, obs_cat, and fcst_cat to netcdf output
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#1943 Add SEEPS MPR score, obs category amnd forecasr category to Net…
…CDF output
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#1943 Added grid_stat_UK_SEEPS
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#1943 Corrected env_name for seeps climo
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#1943 Moved density_radius_rad from src/libcode/vx_statistics/compute…
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#1943 Fix uninitialied variables
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#1943 activated weighted SEEPS score
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Merge branch 'feature_1943_gridstat_seeps' of github.com:dtcenter/MET…
… into feature_1943_gridstat_seeps
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#1943 Added seeps_p1_thresh and removed seeps_qc
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#1943 Added seeps_p1_thresh and removed seeps_qc
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#1943 Added seeps_p1_thresh and removed seeps_qc
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#1943 use seeps_p1_thresh for SEEPS QC for p1 value
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#1943 use seeps_p1_thresh for SEEPS QC for p1 value
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#1943 Use seeps_p1_thresh for SEEPS QC for p1 value
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#1943 Replaced SEEPS_QC to SEEPS_P1_THRESH
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#1943 Turn off weighted SEEPS score
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Feature #2321 tc_diag_changes (#2347)
Co-authored-by: Jonathan Vigh <[email protected]>
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Merge pull request #2344 from dtcenter/feature_1943_gridstat_seeps
Feature 1943 gridstat seeps
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#2085 Renamed from print_nc2ascii.py and moved to scripts/utility dir…
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#2085 Renamed from print_nc2ascii.py and moved to scripts/utility dir…
…ectory
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#2085 Added scripts/utility/Makefile
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Updates documentation to reflect new Python utility script print_poin…
…tnc2ascii.py for printing an ASCII representation of the MET point observation NetCDF files.
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#2085 Added --out option to usage
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Merge branch 'feature_2085_R_to_python_pntnc2ascii_R' of github.com:d…
…tcenter/MET into feature_2085_R_to_python_pntnc2ascii_R
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Corrects path in command example, and changes heading to avoid lookin…
…g like a C++ tool.
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Merge branch 'feature_2085_R_to_python_pntnc2ascii_R' of github.com:d…
…tcenter/MET into feature_2085_R_to_python_pntnc2ascii_R
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Merge branch 'feature_2085_R_to_python_pntnc2ascii_R' of github.com:d…
…tcenter/MET into feature_2085_R_to_python_pntnc2ascii_R
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Merge branch 'feature_2085_R_to_python_pntnc2ascii_R' of github.com:d…
…tcenter/MET into feature_2085_R_to_python_pntnc2ascii_R
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Merge branch 'feature_2085_R_to_python_pntnc2ascii_R' of github.com:d…
…tcenter/MET into feature_2085_R_to_python_pntnc2ascii_R
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Merge pull request #2341 from dtcenter/feature_2085_R_to_python_pntnc…
…2ascii_R Feature 2085 convert R script (pntnc2ascii.r) to python
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Updates documentation about Python Embedding for point observations a…
…tions in Appendix F, and adds a link for the section on Python embedding for MPR data.
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Removes a redundant section on Python Embedding for Point Observation…
…s that is better suited for Appendix F. Appendix F is already referenced in describing ASCII2NC. Cleaned up some wording regarding Point2Grid Python embedding.
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Merge pull request #2340 from dtcenter/feature_2285_python_embedding_…
…converting Feature 2302 python embedding converting
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#1943 Load SEEPS climo only if SEEPS is enabled
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#1943 Corrected path for PPT24_seepsweights.nc
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Co-authored-by: Howard Soh <[email protected]>
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#1943 Corrected path for print_pointnc2ascii.py
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#1943 SEEPS is not computed if SEEPS climo is not loaded
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#1943 load SEEPS climo if activated
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#1943 load SEEPS climo if activated
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Per #1943, tweak log messages for SEEPS pointing users to setting the…
… MET_SEEPS_GRID_CLIMO_NAME or MET_SEEPS_POINT_CLIMO_NAME environment variables.
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Merge pull request #2368 from dtcenter/feature_1943_gridstat_seeps
Feature #1943 gridstat_seeps: Load SEEPS climo only if SEEPS is enabled
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#2370 Support 6 line headers for AERONET V3. Disabled the sanity chec…
…king with site_name
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#2370 Added ascii2nc_AERONET_v3_concat
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#2370 Support Month column and yyyy-MMM
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Merge pull request #2372 from dtcenter/bugfix_2370_aeronetv3
Bugfix 2370 aeronetv3
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update version of Python used in GHA workflow because apparently 3.6 …
…has been deprecated
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Co-authored-by: jprestop <[email protected]>
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#2370 checking NaN and print out "NA" to avoid an Exception
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#2370 AOD 550 is interpolated only AOD 440 and 650 are not negative v…
…alues
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Merge pull request #2398 from dtcenter/bugfix_2370_aeronetv3
Bugfix 2370 aeronetv3
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#2387 Convert integer to string for log message
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#2387 Do not increase n_file_obs when n_derived_obs is increased
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#2387 Changed to_string to str_format
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Merge pull request #2400 from dtcenter/bugfix_2387_pb2nc_obs_count
Bugfix 2387 pb2nc obs count
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Feature #2388 Fix Python environment issue (#2407)
Co-authored-by: John Halley Gotway <[email protected]>
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Updates to sonarqube setup on seneca.
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Merge branch 'develop' of https://github.com/dtcenter/MET into develop
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#2228 Added parameters for ellipsoidal earth
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#2228 Added functions for ellipsoidal earth (polar stereographics)
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#2228 Support polar stereographics without scale_factor and ellipsoid…
…al earth
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#2218 Addedmrtwo unit tests for polar stereographics
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#2218 convert index to meter at xy_to_latlon
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#2218 Changed the order of members
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#2218 Initialize newly added members
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Feature #2415 develop modulefiles (#2417)
* Updated module and config files * Reverting to what was in develop
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Howard Soh committed
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#2218 Set dy_km and do not set swap_to_north for polar stereographics
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#2218 Check and adjust semi_major_axis in meters
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#2218 PAss negative lon to st_latlon_to_xy_func
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#2218 Removed a warning for ellipsoidal earth
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Merge pull request #2418 from dtcenter/feature_2218_polar_stereographic
Feature #2218 develop polar stereographic
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#2218 Initialize polar stereographics parametres for ellipsoial earth
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#2218 Initialize polar stereographics parameters for ellipsoidal earth
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Merge pull request #2434 from dtcenter/feature_2218_polar_stereographic
#2218 Initialize polar stereographics parameters for ellipsoidal earth
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Hotfix for develop, for #2437, forgot one reference to the search_par…
…ent for a dictionary lookup.
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Doc-only update the develop branch clarifying the description of the …
…interp dictionary. The parse_conf_interp() function supports the method and width entries being defined as arrays. It automatically processes all possible permutations of their values.
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Feature #2421 update base image (#2440)
Co-authored-by: John Halley Gotway <[email protected]>
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Remove pdf from builds and update to Python 3.8
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