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Update bactopia-teton to 1.0.5 #51037

Merged
merged 2 commits into from
Sep 30, 2024
Merged

Update bactopia-teton to 1.0.5 #51037

merged 2 commits into from
Sep 30, 2024

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@BiocondaBot BiocondaBot commented Sep 30, 2024

Update bactopia-teton: 1.0.41.0.5

install with bioconda Conda

Info Link or Description
Recipe recipes/bactopia-teton (click to view/edit other files)
Summary Methods used by Bactopia for taxonomic classification
Home https://bactopia.github.io/
Releases https://github.com/bactopia/bactopia-teton/tags
Recipe Maintainer(s) @rpetit3
Author @bactopia

This pull request was automatically generated (see docs).

Summary by CodeRabbit

  • New Features

    • Updated the bactopia-teton package to version 1.0.5.
    • Added a new runtime dependency: sizemeup >=1.0.2.
  • Bug Fixes

    • Updated the SHA256 checksum for the source tarball to ensure integrity.

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Sep 30, 2024
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coderabbitai bot commented Sep 30, 2024

📝 Walkthrough
📝 Walkthrough

Walkthrough

The pull request involves an update to the meta.yaml file for the bactopia-teton package. The version has been incremented from 1.0.4 to 1.0.5, and the SHA256 checksum for the source tarball has been updated accordingly. A new runtime dependency, sizemeup >=1.0.2, has also been added. No other changes to the package's build configuration or metadata have been made.

Changes

File Change Summary
recipes/bactopia-teton/meta.yaml Version updated from 1.0.4 to 1.0.5; SHA256 checksum updated from 648b476bcf15bc177df1a814d782d318ee6b78a38e2ccb8268c569cbd1576504 to 4340da1ca721850564dcc05491ee396d1f9a1bbf662de5ede12fa29c50c1f3be; new requirement sizemeup >=1.0.2 added.

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Actionable comments posted: 1

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between ec04291 and e62d8ec.

📒 Files selected for processing (1)
  • recipes/bactopia-teton/meta.yaml (3 hunks)
🧰 Additional context used
🪛 yamllint
recipes/bactopia-teton/meta.yaml

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

🔇 Additional comments (2)
recipes/bactopia-teton/meta.yaml (2)

1-1: Version update looks good.

The version has been correctly updated from 1.0.4 to 1.0.5, which is consistent with the PR objectives.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


15-15: SHA256 checksum update looks good.

The SHA256 checksum has been updated, which is expected with a new version. To ensure the integrity of the package:

Please run the following script to verify the checksum:

@@ -28,6 +28,7 @@ requirements:
- pigz
- python >=3.6,<3.11
- sed
- sizemeup >=1.0.2
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💡 Codebase verification

Documentation Update Required

A new runtime requirement sizemeup >=1.0.2 has been added, but there are no corresponding updates in the documentation (CHANGELOG.md, README.md, or docs/). Please ensure that this new dependency is properly documented to inform users about the change.

🔗 Analysis chain

New requirement added: Please provide more context.

A new runtime requirement sizemeup >=1.0.2 has been added. While this may be necessary for the new version:

  1. Could you please explain the reason for adding this new dependency?
  2. Are there any implications for existing users or workflows?
  3. Has this change been documented in the package's changelog or documentation?

To ensure this change is properly documented, please run:

🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Check for documentation updates related to the new requirement

# Check if there's a CHANGELOG.md file
if [ -f CHANGELOG.md ]; then
    echo "Checking CHANGELOG.md for mentions of sizemeup:"
    grep -i "sizemeup" CHANGELOG.md
else
    echo "CHANGELOG.md not found. Please ensure the new requirement is documented."
fi

# Check README or other documentation files
echo "Checking README and other documentation files for mentions of sizemeup:"
rg -i "sizemeup" README.md docs/ || echo "No mentions found. Please update documentation."

Length of output: 517

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3 participants