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[c++] Parameterize schema-creation unit-test helpers #2939

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merged 3 commits into from
Aug 30, 2024
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@johnkerl johnkerl commented Aug 28, 2024

Issue and/or context: This is a line-count-reducing under-diff following on #2936 for issue #2407 / [sc-51048].

The intended Python and R API changes are all agreed on and finalized as described in #2407.

Changes:

Some prep for having variant-indexed dataframe objects in libtiledbsoma test so that #2916 and #2917 can be unit-tested.

This will get put to work for other datatypes on #2916 and #2917.

Notes for Reviewer:

#2785 is unreviewable as-is: besides being a WIP, it's an all-in-one experimental area. Smaller PRs such as this one are being offered for manageable review.

@johnkerl johnkerl marked this pull request as draft August 28, 2024 19:24
@johnkerl johnkerl force-pushed the kerl/step-two-temp branch from 67f5b66 to 5947c98 Compare August 28, 2024 19:26
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codecov bot commented Aug 28, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 90.02%. Comparing base (c8d6ca2) to head (f577de6).
Report is 1 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #2939      +/-   ##
==========================================
+ Coverage   89.87%   90.02%   +0.15%     
==========================================
  Files          38       38              
  Lines        3999     3999              
==========================================
+ Hits         3594     3600       +6     
+ Misses        405      399       -6     
Flag Coverage Δ
python 90.02% <ø> (+0.15%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Components Coverage Δ
python_api 90.02% <ø> (+0.15%) ⬆️
libtiledbsoma ∅ <ø> (∅)

@johnkerl johnkerl force-pushed the kerl/step-two-temp branch 2 times, most recently from c50b714 to 4889f93 Compare August 28, 2024 20:29
@johnkerl johnkerl changed the title [c++] Parameterize schema-creation unit-test helpers [WIP] [c++] Parameterize schema-creation unit-test helpers Aug 28, 2024
@johnkerl johnkerl requested a review from nguyenv August 28, 2024 20:31
@johnkerl johnkerl marked this pull request as ready for review August 28, 2024 20:31
@johnkerl johnkerl marked this pull request as draft August 28, 2024 22:18
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Leaving this in draft until I address unit-test failures

@johnkerl johnkerl force-pushed the kerl/step-two-temp branch 3 times, most recently from fdfb585 to b43f5f7 Compare August 29, 2024 18:23
@johnkerl johnkerl force-pushed the kerl/step-two-temp branch 2 times, most recently from 14fd597 to d7be17a Compare August 29, 2024 19:25
@johnkerl johnkerl marked this pull request as ready for review August 29, 2024 19:27
@johnkerl johnkerl force-pushed the kerl/step-two-temp branch from d7be17a to 79f8d09 Compare August 29, 2024 19:30
@johnkerl johnkerl marked this pull request as draft August 29, 2024 19:33
@johnkerl johnkerl marked this pull request as ready for review August 29, 2024 20:01
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@nguyenv nguyenv left a comment

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lgtm. Comments are just informational.

libtiledbsoma/src/utils/arrow_adapter.cc Show resolved Hide resolved
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@johnkerl johnkerl merged commit da76951 into main Aug 30, 2024
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@johnkerl johnkerl deleted the kerl/step-two-temp branch August 30, 2024 15:49
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2 participants