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Merge PR bioconda#21057, commits were: 
 * A new recipe for BtToxin_scanner
 * Merge pull request bioconda#9 from bioconda/master

update local
 * Merge pull request bioconda#7 from bioconda/master

update local master
 * Merge pull request bioconda#5 from bioconda/master

update local files
 * Merge pull request #3 from bioconda/master

update local fork
 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes
 * Merge pull request #1 from bioconda/master

update local recipes
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Hualin Liu authored Mar 24, 2020
1 parent 072209c commit 335775f
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21 changes: 21 additions & 0 deletions recipes/bttoxin_scanner/build.sh
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#!/bin/sh
mkdir -p $PREFIX/bin
mkdir -p $PREFIX/bin/lib

cp BtToxin_scanner.pl $PREFIX/bin/BtToxin_scanner
cp Scripts/*.pl $PREFIX/bin/
cp lib/own.pm $PREFIX/bin/lib/
cp -r BtToxinScanner_db $PREFIX/bin/BtToxinScanner_db
cp -r BtToxinScanner_models $PREFIX/bin/BtToxinScanner_models


chmod a+x $PREFIX/bin/BtToxin_scanner
chmod a+x $PREFIX/bin/coreprocess.pl
chmod a+x $PREFIX/bin/get_genes_table.pl
chmod a+x $PREFIX/bin/get_all_info_nucl.pl
chmod a+x $PREFIX/bin/get_all_info_orfs.pl
chmod a+x $PREFIX/bin/get_all_info_prot.pl
chmod a+x $PREFIX/bin/lib/own.pm


BtToxin_scanner --version
47 changes: 47 additions & 0 deletions recipes/bttoxin_scanner/meta.yaml
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{% set name = "bttoxin_scanner" %}
{% set version = "2.0.1" %}

package:
name: '{{ name }}'
version: '{{ version }}'

source:
url: https://github.com/liaochenlanruo/BtToxin_scanner/archive/v{{ version }}.tar.gz
sha256: 5c7f5c22b9cb44114e5b9afcabc717a37840a36861a7926e3579cdb42fdb3eea

build:
number: 0
noarch: generic

requirements:
host:
- perl
- perl-bioperl >=1.7.2
- perl-file-tee

run:
- blast
- hmmer
- libsvm
- perl-pod-usage
- perl-getopt-long
- perl-file-tee
- pgcgap >=1.0.13

test:
commands:
- BtToxin_scanner --version

about:
home: https://github.com/liaochenlanruo/BtToxin_scanner/blob/master/README.md
license: GPLv3
license_family: GPL
license_file: LICENSE
summary: A toxin exploration tool for Bacillus thuringiensis
dev_url: https://github.com/liaochenlanruo/BtToxin_scanner/tree/master

extra:
identifiers:
- biotools:BtToxin_scanner
recipe-maintainers:
- liaochenlanruo

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