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Merge PR bioconda#21057, commits were: * A new recipe for BtToxin_scanner * Merge pull request bioconda#9 from bioconda/master update local * Merge pull request bioconda#7 from bioconda/master update local master * Merge pull request bioconda#5 from bioconda/master update local files * Merge pull request #3 from bioconda/master update local fork * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge pull request #1 from bioconda/master update local recipes
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Hualin Liu
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Mar 24, 2020
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#!/bin/sh | ||
mkdir -p $PREFIX/bin | ||
mkdir -p $PREFIX/bin/lib | ||
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cp BtToxin_scanner.pl $PREFIX/bin/BtToxin_scanner | ||
cp Scripts/*.pl $PREFIX/bin/ | ||
cp lib/own.pm $PREFIX/bin/lib/ | ||
cp -r BtToxinScanner_db $PREFIX/bin/BtToxinScanner_db | ||
cp -r BtToxinScanner_models $PREFIX/bin/BtToxinScanner_models | ||
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chmod a+x $PREFIX/bin/BtToxin_scanner | ||
chmod a+x $PREFIX/bin/coreprocess.pl | ||
chmod a+x $PREFIX/bin/get_genes_table.pl | ||
chmod a+x $PREFIX/bin/get_all_info_nucl.pl | ||
chmod a+x $PREFIX/bin/get_all_info_orfs.pl | ||
chmod a+x $PREFIX/bin/get_all_info_prot.pl | ||
chmod a+x $PREFIX/bin/lib/own.pm | ||
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BtToxin_scanner --version |
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{% set name = "bttoxin_scanner" %} | ||
{% set version = "2.0.1" %} | ||
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package: | ||
name: '{{ name }}' | ||
version: '{{ version }}' | ||
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source: | ||
url: https://github.com/liaochenlanruo/BtToxin_scanner/archive/v{{ version }}.tar.gz | ||
sha256: 5c7f5c22b9cb44114e5b9afcabc717a37840a36861a7926e3579cdb42fdb3eea | ||
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build: | ||
number: 0 | ||
noarch: generic | ||
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requirements: | ||
host: | ||
- perl | ||
- perl-bioperl >=1.7.2 | ||
- perl-file-tee | ||
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run: | ||
- blast | ||
- hmmer | ||
- libsvm | ||
- perl-pod-usage | ||
- perl-getopt-long | ||
- perl-file-tee | ||
- pgcgap >=1.0.13 | ||
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test: | ||
commands: | ||
- BtToxin_scanner --version | ||
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about: | ||
home: https://github.com/liaochenlanruo/BtToxin_scanner/blob/master/README.md | ||
license: GPLv3 | ||
license_family: GPL | ||
license_file: LICENSE | ||
summary: A toxin exploration tool for Bacillus thuringiensis | ||
dev_url: https://github.com/liaochenlanruo/BtToxin_scanner/tree/master | ||
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extra: | ||
identifiers: | ||
- biotools:BtToxin_scanner | ||
recipe-maintainers: | ||
- liaochenlanruo |