Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

DV.7.1 with ORF1a:K3353R (>150 seq. Mainly Spain, Israel, and USA) #2261

Closed
oobb45729 opened this issue Sep 4, 2023 · 3 comments
Closed

DV.7.1 with ORF1a:K3353R (>150 seq. Mainly Spain, Israel, and USA) #2261

oobb45729 opened this issue Sep 4, 2023 · 3 comments
Labels
low priority For issues that are low priority for now

Comments

@oobb45729
Copy link

Transferred from sars-cov-2-variants/lineage-proposals#559
ORF1a:K3353R is one of the most homoplasic mutation. It is also in Beta.
https://cov-spectrum.org/explore/World/AllSamples/Past6M/variants?variantQuery=nextcladePangoLineage%3ADV.7*%26%21S%3AL455L%26%21S%3AF456F%26ORF1a%3AK3353R%26%21G8216A&
1
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_1cf1a_63ae80.json?c=gt-nuc_10323&gmax=11323&gmin=9323&label=id:node_7688752
@oobb45729 oobb45729 mentioned this issue Sep 4, 2023
Closed
@FedeGueli FedeGueli mentioned this issue Sep 8, 2023
Closed
@oobb45729 oobb45729 changed the title DV.7.1 with ORF1a:K3353R (about 100 seq. Mainly Spain, Israel, and USA) DV.7.1 with ORF1a:K3353R (>150 seq. Mainly Spain, Israel, and USA) Sep 9, 2023
@corneliusroemer
Copy link
Contributor

Let's subdivide DV.7.1 if/once there are spike things happening

@corneliusroemer corneliusroemer added the low priority For issues that are low priority for now label Sep 10, 2023
@FedeGueli
Copy link
Contributor

There are already S:G485R and S:K679R on the move

@corneliusroemer
Copy link
Contributor

Designated the 679R one inside

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
low priority For issues that are low priority for now
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
3 participants
@corneliusroemer @FedeGueli @oobb45729