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new version #51269
new version #51269
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📝 Walkthrough📝 WalkthroughWalkthroughThe pull request introduces updates to the Possibly related PRs
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🚧 Files skipped from review as they are similar to previous changes (1)
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Actionable comments posted: 0
🧹 Outside diff range and nitpick comments (1)
recipes/orthologer/meta.yaml (1)
55-55
: Consider revising the summary for more specificity.The updated summary "Establish orthology among fasta files." is concise but less specific about the package's full functionality compared to the previous version. It no longer mentions mapping to OrthoDB, which seems to be a key feature of the package.
Consider revising the summary to include more specific information about the package's capabilities. For example:
summary: Establish orthology among fasta files and map genes to OrthoDB.This revision maintains brevity while capturing both main functionalities of the package.
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- recipes/orthologer/meta.yaml (3 hunks)
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🔇 Additional comments (4)
recipes/orthologer/meta.yaml (4)
56-56
: Description addition is beneficial.The new description "Map genes to OrthoDB as well as finding orthology among a set of fasta files." provides a clear and concise explanation of the package's main functionalities. It complements the summary well by offering additional details about the package's capabilities.
Line range hint
1-76
: Overall changes are consistent and appropriate for a version update.The updates to the meta.yaml file are consistent with a version upgrade from 3.4.2 to 3.5.0. The changes include:
- Updated version and checksum
- Added new dependency (busco)
- Updated summary
- Added description
These changes maintain the correct structure for a Conda package recipe and provide updated information about the package's functionality and requirements.
To ensure all necessary updates have been made, please verify:
- The package builds successfully with the new configuration.
- The package's documentation or release notes confirm the need for the new busco dependency.
- All functionalities mentioned in the summary and description are actually provided by version 3.5.0 of the package.
2-3
: Version and checksum update looks good.The version has been correctly updated to 3.5.0 as per the PR description. The SHA256 checksum has also been updated, which is necessary for the new version.
Please verify that the new SHA256 checksum is correct for version 3.5.0 of the package. You can use the following command to check:
44-44
: New dependency added and indentation corrected.The addition of
busco >= 5.7.0
as a run dependency is noted. This is likely related to new features or requirements in version 3.5.0. The indentation fordiamond
andbiopython
has also been corrected, improving the YAML file's structure.Please confirm that version 3.5.0 of orthologer requires busco >= 5.7.0. You can check the package's documentation or release notes to verify this dependency. Also, ensure that this version of busco is available in the bioconda channel.
Update to version 3.5.0