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new version (#51269)
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* added orthologer

* WIP:orthologer

* orthologer

* version

* minor

* orthologer version

* updated meta

* orthologer 3.2.3

* updated sha256

* Fix SHA256

* minor

* spdlog in meta

* orthologer: updated cmake OpenMP detection

* last macos fixes are now actually there

* meta

* updated brhclus - now compiles with clang

* fix macos

* meta/bash macos

* even more clang

* more cmake and macos issues

* updated installer

* update build and host section

* clean up recipe

* updated to new version

* path not needed with new version

* updated build number

* patch not needed anymore

* patch not needed anymore

* update for new package with macos fix

* updated tests and macos fix

* new sha256sum

* orthologer 3.3.2

* orthologer 3.3.2 - build number reset

* sed macos, do not do in place edit

* require bash 4.1 - will this work for macos?

* orthologer 3.3.2 - bash shebang update (macos)

* updated description

* version 3.4.0

* upd 3.4.0

* upd 3.4.0

* upd 3.4.0

* upd 3.4.0

* upd 3.4.0

* upd 3.4.0

* version 3.4.1

* update summary

* update to orthologer 3.4.2

* update license in meta.yaml

* added busco dep

* update to 3.5.0

* updated orthologer meta

* updated orthologer meta

---------

Co-authored-by: Martin Grigorov <[email protected]>
Co-authored-by: mencian <[email protected]>
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3 people authored Oct 9, 2024
1 parent 4c7a9dc commit 18aa451
Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions recipes/orthologer/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{% set name = "orthologer" %}
{% set version = "3.4.2" %}
{% set sha256 = "fb8d11ef54d7232b150e5e46fbd15f9540a083064544d481f8fe9c9aea6b653e" %}
{% set version = "3.5.0" %}
{% set sha256 = "76bd68cd73d5989d658a6ba0ecefec84e674f85878b75904c76fa557ce5dd2b5" %}

package:
name: {{ name }}
Expand Down Expand Up @@ -41,6 +41,7 @@ requirements:
- diamond
- biopython
- numpy
- busco >=5.7.0

test:
commands:
Expand All @@ -51,7 +52,8 @@ about:
license: GPL3
license_family: GPL3
license_file: LICENSE
summary: "Find orthologous genes as well as mapping to OrthoDB."
summary: Establish orthology among fasta files.
description: Map genes to OrthoDB as well as finding orthology among a set of fasta files.
dev_url: https://gitlab.com/ezlab/orthologer_container
doc_url: https://orthologer.ezlab.org/#on-orthodb-data

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