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Update r-diffcorr to 0.4.4 #51039

Merged
merged 1 commit into from
Sep 30, 2024
Merged

Update r-diffcorr to 0.4.4 #51039

merged 1 commit into from
Sep 30, 2024

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@BiocondaBot BiocondaBot commented Sep 30, 2024

Update r-diffcorr: 0.4.30.4.4

install with bioconda Conda

Info Link or Description
Recipe recipes/r-diffcorr (click to view/edit other files)
Summary A method for identifying pattern changes between 2 experimental conditions in correlation networks (e.g., gene co-expression networks), which builds on a commonly used association measure, such as Pearson's correlation coefficient. This package includes functions to calculate correlation matrices for high-dimensional dataset and to test differential correlation, which means the changes in the correlation relationship among variables (e.g., genes and metabolites) between 2 experimental conditions.
Home https://CRAN.R-project.org/package=DiffCorr
Releases https://crandb.r-pkg.org/DiffCorr/all

Note: Upstream dependencies appear to have changed

  host:
+   - r-graphics 
+   - r-grdevices 
+   - r-stats 
+   - r-utils 
  run:
+   - r-graphics 
+   - r-grdevices 
+   - r-stats 
+   - r-utils 

This pull request was automatically generated (see docs).

Summary by CodeRabbit

  • New Features

    • Updated the r-diffcorr package to version 0.4.4, enhancing functionality and performance.
  • Bug Fixes

    • Adjusted the source URL and SHA256 checksum to ensure package integrity and correct versioning.

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Sep 30, 2024
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coderabbitai bot commented Sep 30, 2024

📝 Walkthrough

Walkthrough

The pull request updates the meta.yaml file for the r-diffcorr package, changing the version from 0.4.3 to 0.4.4. It includes an updated source URL and a new SHA256 checksum corresponding to the new version. Other settings, such as the build number, noarch, and rpaths, remain unchanged. Dependencies listed in the host and run sections are consistent with the previous version, and the test commands for loading the DiffCorr library are also unchanged.

Changes

File Path Change Summary
recipes/r-diffcorr/meta.yaml - Version updated from 0.4.3 to 0.4.4
- SHA256 checksum updated
- Source URL updated
- Build number, noarch, and rpaths settings unchanged
- Host and run section requirements remain the same
- Test commands for loading the DiffCorr library unchanged

Possibly related PRs


📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 2092e27 and 29d3ea1.

📒 Files selected for processing (1)
  • recipes/r-diffcorr/meta.yaml (2 hunks)
🧰 Additional context used
🪛 yamllint
recipes/r-diffcorr/meta.yaml

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

🔇 Additional comments (4)
recipes/r-diffcorr/meta.yaml (4)

1-1: Version update looks good.

The version has been correctly updated to 0.4.4, which aligns with the PR objective.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


1-1: Ignore yamllint warning about '%' character.

The static analysis tool (yamllint) reported a syntax error for the '%' character at the beginning of the file. This is a false positive. The '%' is part of a Jinja2 template syntax, which is commonly used in Conda recipes. The syntax is correct for this type of file and doesn't need to be changed.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


Line range hint 1-11: Summary: PR changes look good.

This PR successfully updates the r-diffcorr package from version 0.4.3 to 0.4.4. The changes include:

  1. Updated version number
  2. Updated SHA256 checksum

These changes align with the PR objectives. No unexpected modifications were found, and the rest of the recipe remains unchanged. The PR is ready for merge, pending the verification of the SHA256 checksum.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


11-11: SHA256 checksum has been updated.

The SHA256 checksum has been changed, which is expected when updating the package version. However, it's important to verify its correctness.

To verify the SHA256 checksum, you can run the following script:


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@martin-g martin-g merged commit 2906243 into master Sep 30, 2024
7 checks passed
@martin-g martin-g deleted the bump/r_diffcorr branch September 30, 2024 09:00
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