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Soften pin on 3.10, Add CI 3.13 to CI
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bede committed Dec 14, 2024
1 parent 831a6c1 commit 6c6318b
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3 changes: 2 additions & 1 deletion .github/workflows/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,7 @@ jobs:
strategy:
matrix:
os: [ubuntu-24.04]
python-version: ["3.10", "3.13"]
defaults:
run:
shell: bash -el {0}
Expand All @@ -21,7 +22,7 @@ jobs:
with:
activate-environment: hostile
environment-file: environment.yml
python-version: "3.10"
python-version: ${{ matrix.python-version }}
auto-activate-base: false
conda-remove-defaults: true
- run: pip install '.[dev]'
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2 changes: 1 addition & 1 deletion environment.yml
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ channels:
- conda-forge
- bioconda
dependencies:
- python=3.10
- python>=3.10
- pip
- samtools>=1.17
- minimap2>=2.28
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