Next release #70
Next release #70
Conversation
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Talking to @mmelendrez we should probably include information about the CDS These numbers can be automatically fetched from genbank info from the |
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@averagehat I'm not sure yet how this coding region will affect degen.py |
| File Should Not Be Empty ${actual} | ||
| ${actual_contents} = Get File ${actual} | ||
| ${expected_contents} = Get File ${expected} | ||
| Should Be Not Equal As Strings ${expected_contents} ${actual_contents} |
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I don't know how to tell pybot to check that all lines have NON-CODING
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You will have to change the expected output (file tests/testinput/ctl_expected.tsv)
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All we need to do is ensure every line has noncoding in them. Seems like there should be a more dynamic way.
Like grep for non coding. Then wc the results and make sure same amount of lines as there are in file
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I have added the plot_muts script directly to this branch. It worked for the examples Irina gave me. I would like to make the plot a bit prettier at some point, plots still look like what's shown in #64 (but without the interval) |
…e. Added exception for better error message if invalid fasta identifier
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Can we add a test dataset into |
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Are we going to wait until poisson is finished or should we attempt to proceed with release cycle |
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@necrolyte2 I would suggest releasing this separately there is already a lot of stuff in it. It will be easier to look at a fresh diff as well. |
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Also the |
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Shell we begin the merging/renaming procedure? I'll let you merge( @averagehat ) |
ctleptop.py needs documentation