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Idc update (OHIF#8)
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* feat: 🎸 Update react-vtkjs-viewport usage to use requestPool (OHIF#1984)

* feat: 🎸 Update react-vtkjs-viewport usage to use requestPool

* Fix import of react-vtkjs-viewport to cornerstone-tools path.

* Increase maximum load time of MPR test now we are throttling requests.

* Remove debugger

Co-authored-by: Erik Ziegler <[email protected]>

* chore(release): publish [skip ci]

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* fix: Avoid lerna:restore unless we are on Netlify (closes OHIF#1926, OHIF#1996)

* wip

* fix: Fix incorrect command name in Percy test (OHIF#1999)

* perf(stackPrefetch): Added stackPrefetch config with 20 max concurrent requests (OHIF#2000)

Co-authored-by: Danny Brown <[email protected]>

* chore(release): publish [skip ci]

 - @ohif/[email protected]
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* feat: 🎸 Filter/promote multiple series instances (OHIF#1533)

improve filter/promote to be applied on multiple series instances

✅ Closes: 1532

Co-authored-by: Rodolfo Ladeira <[email protected]>

* chore(release): publish [skip ci]

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* fix: Updated react-cornerstone-viewport to version 4.0.2 (OHIF#2001)

Co-authored-by: Danny Brown <[email protected]>

* chore(release): publish [skip ci]

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 - @ohif/[email protected]

* fix: 🐛 Fail gracefully on an MPR load error (OHIF#1992)

* feat: 🎸 Update react-vtkjs-viewport usage to use requestPool

* Fix import of react-vtkjs-viewport to cornerstone-tools path.

* Increase maximum load time of MPR test now we are throttling requests.

* fix: 🐛 Fail gracefully on an MPR load error

* Respond to reviewer comments.

* chore(release): publish [skip ci]

 - @ohif/[email protected]
 - @ohif/[email protected]

* [IDC-1994] Sort series list by SeriesNumber, and sort by same SeriesNumber by date/time. (OHIF#2010)

* Sort based on SeriesNumber and SeriesDate/SeriesTime.

* Harden, and perform final sort in algorithm if last N entries have the same SeriesNumber.

* Switch to insertion rather than sorting as sorting is too slow. Reimplement low priority sorting into new insertion method.

* Fix local file viewing.

* chore(release): publish [skip ci]

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* [IDC-2017] Harden segmentation import to support more SEGs (OHIF#2024)

* fix: 🐛 Upgrade dcmjs version to support more SEGs

* chore(release): publish [skip ci]

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* [IDC-1939] Debug Dialog part 1 (OHIF#2011)

* WIP debug dialog

* Rename the p10 downloader extension to debugger extension, add button to toolbar. Deactivate it by default.

* Fix unit tests

* chore(release): publish [skip ci]

 - @ohif/[email protected]
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* IDC-1532 multiple series search google (OHIF#2026)

* Multiple series search for google cloud adapter.

* Revert IDC config.

* fix: 🐛 Series filtering on multiple series for google

* Revert changes to default config.

* Address reviewers comments.

* Fixed spelling mistakes

* chore(release): publish [skip ci]

 - @ohif/[email protected]
 - @ohif/[email protected]
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* Split query parameter calls. (OHIF#2035)

* chore(release): publish [skip ci]

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* [IDC-1672] Highlight SEG segment/ RT structure when click to jump. (OHIF#2034)

* Highlight for RTSTRUCT.

* SEG temp crosshairs.

* Disable RT highlighting for now.

* Remove TODO

* chore(release): publish [skip ci]

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* [IDC-1129] - DICOM Tag Viewer extension (OHIF#2022)

* WIP render top level tags.

* Add drop down to select series.

* Fix errors with type 2 sequences.

* WIP swap instance.

* Fix formatting and make fullscreen.

* Remove debuggers.

* Finish formatting.

* Fix error with double SeriesNumber deconstruction.

* Address reviewer comments.

* chore(release): publish [skip ci]

 - @ohif/[email protected]
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* [IDC-2006] - optional mailTo for debugging extension. (OHIF#2027)

* WIP debug dialog

* Rename the p10 downloader extension to debugger extension, add button to toolbar. Deactivate it by default.

* Fix unit tests

* WIP

* WIP

* Finish mailTo

* chore(release): publish [skip ci]

 - @ohif/[email protected]
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* [IDC-1905] Hover tooltips for Segmentation + RTSTRUCT extension (OHIF#2044)

* WIP debug dialog

* Rename the p10 downloader extension to debugger extension, add button to toolbar. Deactivate it by default.

* Fix unit tests

* WIP

* WIP

* Finish mailTo

* tooltop

* chore(release): publish [skip ci]

 - @ohif/[email protected]
 - @ohif/[email protected]
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* [IDC-2049] Sort Tags in Tag browser split items in sequences, add indent after space. (OHIF#2053)

* Sort tag browser, add items, add indent.

* Remove debugger.

* chore(release): publish [skip ci]

 - @ohif/[email protected]
 - @ohif/[email protected]

* Update react-cornerstone-viewport for performance improvements (OHIF#2062)

* Update react-cornerstone-viewport

* Bump react-cornerstone-viewport version.

* Comment out tests which always cause problems.

* chore(release): publish [skip ci]

 - @ohif/[email protected]
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* [IDC-2052] PWA start url (OHIF#2070)

Change start_url in manifest.json from "./index.html" to "./"

Co-authored-by: Woonchan Cho <[email protected]>

* chore(release): publish [skip ci]

 - @ohif/[email protected]

* fix: Enable port changes for Docker image using the PORT variable (OHIF#2016)

* fix: use SeriesMetadata method instead of property in findMostRecentStructuredReport (OHIF#2038)

fixes OHIF#1714

Call getInstanceCount() instead of manually checking length (which does not work)

Co-authored-by: Stefan Silviu <[email protected]>

* chore(release): publish [skip ci]

 - @ohif/[email protected]
 - @ohif/[email protected]
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Co-authored-by: Erik Ziegler <[email protected]>
Co-authored-by: ohif-bot <[email protected]>
Co-authored-by: Alex Broaddus <[email protected]>
Co-authored-by: Danny Brown <[email protected]>
Co-authored-by: ladeirarodolfo <[email protected]>
Co-authored-by: Rodolfo Ladeira <[email protected]>
Co-authored-by: Woonchan Cho <[email protected]>
Co-authored-by: Woonchan Cho <[email protected]>
Co-authored-by: Nicolas Byl <[email protected]>
Co-authored-by: Ștefan Silviu-Alexandru <[email protected]>
Co-authored-by: Stefan Silviu <[email protected]>
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6 changes: 6 additions & 0 deletions .docker/Viewer-v2.x/entrypoint.sh
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Expand Up @@ -28,6 +28,12 @@ if [ -n "$CLIENT_ID" ] || [ -n "$HEALTHCARE_API_ENDPOINT" ]
cp /usr/share/nginx/html/google.js /usr/share/nginx/html/app-config.js
fi

if [ -n "${PORT}" ]
then
echo "Changing port to ${PORT}..."
sed -i -e "s/listen 80/listen ${PORT}/g" /etc/nginx/conf.d/default.conf
fi

echo "Starting Nginx to serve the OHIF Viewer..."

exec "$@"
61 changes: 61 additions & 0 deletions extensions/cornerstone/CHANGELOG.md
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Expand Up @@ -3,7 +3,68 @@
All notable changes to this project will be documented in this file. See
[Conventional Commits](https://conventionalcommits.org) for commit guidelines.

<<<<<<< HEAD
## [2.9.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-03)
=======
## [2.9.5](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-29)

**Note:** Version bump only for package @ohif/extension-cornerstone





## [2.9.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-03)

**Note:** Version bump only for package @ohif/extension-cornerstone





## [2.9.3](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-02)

**Note:** Version bump only for package @ohif/extension-cornerstone





## [2.9.2](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-20)


### Bug Fixes

* Updated react-cornerstone-viewport to version 4.0.2 ([#2001](https://github.com/OHIF/Viewers/issues/2001)) ([59ab68b](https://github.com/OHIF/Viewers/commit/59ab68b4edbfec010170c4429c300a53f688bf94))





## [2.9.1](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-20)


### Performance Improvements

* **stackPrefetch:** Added stackPrefetch config with 20 max concurrent requests ([#2000](https://github.com/OHIF/Viewers/issues/2000)) ([3b02a06](https://github.com/OHIF/Viewers/commit/3b02a06f5e250660edde4862ce44147db3dc3ab9))





# [2.9.0](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-18)


### Features

* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))





## [2.8.5](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-05)
>>>>>>> upstream/master
**Note:** Version bump only for package @ohif/extension-cornerstone

Expand Down
4 changes: 2 additions & 2 deletions extensions/cornerstone/package.json
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-cornerstone",
"version": "2.9.4",
"version": "2.9.5",
"description": "OHIF extension for Cornerstone",
"author": "OHIF",
"license": "MIT",
Expand Down Expand Up @@ -51,6 +51,6 @@
"classnames": "^2.2.6",
"lodash.merge": "^4.6.2",
"lodash.throttle": "^4.1.1",
"react-cornerstone-viewport": "4.0.2"
"react-cornerstone-viewport": "4.0.4"
}
}
5 changes: 5 additions & 0 deletions extensions/debugging/src/DebugReportModal.css
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Expand Up @@ -7,3 +7,8 @@
display: flex;
flex-direction: column;
}

.debug-report-modal-buttons-container {
display: flex;
flex-direction: row;
}
48 changes: 38 additions & 10 deletions extensions/debugging/src/DebugReportModal.js
Original file line number Diff line number Diff line change
Expand Up @@ -9,12 +9,21 @@ const DubugReportModal = ({
servers,
extensionManager,
mailTo,
debugModalMessage,
}) => {
const mailToFunction = () => {
const StudyInstanceUID = Object.keys(studies.studyData)[0];
const copyDebugDataToClipboard = () => {
const body = getEmailBody();

const subject = encodeURI(`Issue with Study: ${StudyInstanceUID}`);
const textArea = document.createElement('textarea');

textArea.value = body;
document.body.appendChild(textArea);
textArea.select();
document.execCommand('copy');
document.body.removeChild(textArea);
};

const getEmailBody = () => {
let body = `Enter the description of your problem here: \n\n\n`;

body += `============= SESSION INFO =============\n\n`;
Expand Down Expand Up @@ -55,13 +64,11 @@ const DubugReportModal = ({
body += `URL\t ${window.location.href}\n\n`;

// Layout

const { numRows, numColumns, viewportSpecificData } = viewports;

body += '== Viewport Layout ==\n';
body += `Rows\t${numRows}\n`;
body += `Columns\t${numColumns}\n\n`;

body += '== Viewports ==\n';

Object.keys(viewportSpecificData).forEach(viewportIndex => {
Expand All @@ -75,6 +82,16 @@ const DubugReportModal = ({
body += `[${row},${column}]\t${vsd.SeriesInstanceUID}\n`;
});

return body;
};

const mailToFunction = () => {
const StudyInstanceUID = Object.keys(studies.studyData)[0];

const subject = encodeURI(`Issue with Study: ${StudyInstanceUID}`);

let body = getEmailBody();

// TODO Text dump of rest of stuff.

body = encodeURI(body);
Expand All @@ -84,16 +101,27 @@ const DubugReportModal = ({

return (
<div className="debug-report-modal-container">
{mailTo ? (
{debugModalMessage ? <p>{debugModalMessage}</p> : null}
<div className="debug-report-modal-buttons-container">
{mailTo ? (
<div>
<ToolbarButton
label={'Send Bug Report'}
onClick={mailToFunction}
icon={'envelope-square'}
isActive={false}
/>
</div>
) : null}
<div>
<ToolbarButton
label={'Send Bug Report'}
onClick={mailToFunction}
icon={'envelope-square'}
label={'Copy To Clipboard'}
onClick={copyDebugDataToClipboard}
icon={'clipboard'}
isActive={false}
/>
</div>
) : null}
</div>
<div>
<table>
{getAppVersion()}
Expand Down
1 change: 1 addition & 0 deletions extensions/debugging/src/commandsModule.js
Original file line number Diff line number Diff line change
Expand Up @@ -102,6 +102,7 @@ export function getCommands(context, servicesManager, extensionManager) {
servers={servers}
extensionManager={extensionManager}
mailTo={state.mailTo}
debugModalMessage={state.debugModalMessage}
/>
);
};
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10 changes: 8 additions & 2 deletions extensions/debugging/src/index.js
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Expand Up @@ -36,8 +36,14 @@ export default {
sharedContext.dicomWebClient = dicomWebClient;
}

if (configuration && configuration.mailTo) {
state.mailTo = configuration.mailTo;
if (configuration) {
if (configuration.mailTo) {
state.mailTo = configuration.mailTo;
}

if (configuration.debugModalMessage) {
state.debugModalMessage = configuration.debugModalMessage;
}
}
},

Expand Down
2 changes: 1 addition & 1 deletion extensions/debugging/src/state.js
Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
const state = { mailTo: undefined };
const state = { mailTo: undefined, debugModalMessage: undefined };

export default state;
12 changes: 12 additions & 0 deletions extensions/dicom-pdf/CHANGELOG.md
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Expand Up @@ -19,6 +19,18 @@ All notable changes to this project will be documented in this file. See

**Note:** Version bump only for package @ohif/extension-dicom-pdf

## [1.0.5](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-03)

**Note:** Version bump only for package @ohif/extension-dicom-pdf

## [1.0.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-28)

**Note:** Version bump only for package @ohif/extension-dicom-pdf

## [1.0.3](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-04-02)

**Note:** Version bump only for package @ohif/extension-dicom-pdf

## [1.0.2](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-03-09)

**Note:** Version bump only for package @ohif/extension-dicom-pdf
Expand Down
59 changes: 59 additions & 0 deletions extensions/dicom-rt/CHANGELOG.md
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Expand Up @@ -3,10 +3,69 @@
All notable changes to this project will be documented in this file. See
[Conventional Commits](https://conventionalcommits.org) for commit guidelines.

## [0.4.6](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-17)

**Note:** Version bump only for package @ohif/extension-dicom-rt





## [0.4.5](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-10)

**Note:** Version bump only for package @ohif/extension-dicom-rt





## [0.4.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-10)

**Note:** Version bump only for package @ohif/extension-dicom-rt





## [0.4.3](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-03)

**Note:** Version bump only for package @ohif/extension-dicom-rt





## [0.4.2](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-02)

**Note:** Version bump only for package @ohif/extension-dicom-rt





## [0.4.1](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-28)

**Note:** Version bump only for package @ohif/extension-dicom-rt





# [0.4.0](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-18)


### Features

* 🎸 Update react-vtkjs-viewport usage to use requestPool ([#1984](https://github.com/OHIF/Viewers/issues/1984)) ([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))





# [0.3.0](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-10)

**Note:** Version bump only for package @ohif/extension-dicom-rt

## [0.4.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-10)

**Note:** Version bump only for package @ohif/extension-dicom-rt
Expand Down
2 changes: 1 addition & 1 deletion extensions/dicom-rt/package.json
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-rt",
"version": "0.4.5",
"version": "0.4.6",
"description": "OHIF extension for rendering DICOM RTSTRUCTs on top of cornerstone images.",
"author": "OHIF",
"license": "MIT",
Expand Down
32 changes: 32 additions & 0 deletions extensions/dicom-segmentation/CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,10 @@
All notable changes to this project will be documented in this file. See
[Conventional Commits](https://conventionalcommits.org) for commit guidelines.

## [0.4.6](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-17)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

## [0.4.5](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-10)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation
Expand Down Expand Up @@ -35,6 +39,34 @@ All notable changes to this project will be documented in this file. See

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

## [0.4.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-10)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

## [0.4.3](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-03)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

## [0.4.2](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-02)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

## [0.4.1](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-28)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

# [0.4.0](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-18)

### Features

- 🎸 Update react-vtkjs-viewport usage to use requestPool
([#1984](https://github.com/OHIF/Viewers/issues/1984))
([bb5f30c](https://github.com/OHIF/Viewers/commit/bb5f30ce2a0192d2e021beaaadfff22fd38e17b9))

## [0.3.4](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-08-10)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation

## [0.3.3](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-07-13)

**Note:** Version bump only for package @ohif/extension-dicom-segmentation
Expand Down
2 changes: 1 addition & 1 deletion extensions/dicom-segmentation/package.json
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-segmentation",
"version": "0.4.5",
"version": "0.4.6",
"description": "OHIF extension for viewing segmentations in the 2D MPR view",
"author": "OHIF",
"license": "MIT",
Expand Down
8 changes: 8 additions & 0 deletions extensions/dicom-tag-browser/CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,14 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.

## [0.0.3](https://github.com/OHIF/Viewers/compare/@ohif/[email protected]...@ohif/[email protected]) (2020-09-24)

**Note:** Version bump only for package @ohif/extension-dicom-tag-browser





## 0.0.2 (2020-09-10)

**Note:** Version bump only for package @ohif/extension-dicom-tag-browser
2 changes: 1 addition & 1 deletion extensions/dicom-tag-browser/package.json
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{
"name": "@ohif/extension-dicom-tag-browser",
"version": "0.0.2",
"version": "0.0.3",
"description": "OHIF extension for checking DICOM headers.",
"author": "OHIF",
"license": "MIT",
Expand Down
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