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Doc: Add list of supported SBML test tags #1428

Merged
merged 2 commits into from
Feb 18, 2021
Merged

Doc: Add list of supported SBML test tags #1428

merged 2 commits into from
Feb 18, 2021

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dweindl
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@dweindl dweindl commented Feb 18, 2021

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codecov bot commented Feb 18, 2021

Codecov Report

Merging #1428 (db457fb) into develop (aa59766) will increase coverage by 0.00%.
The diff coverage is n/a.

Impacted file tree graph

@@           Coverage Diff            @@
##           develop    #1428   +/-   ##
========================================
  Coverage    79.73%   79.74%           
========================================
  Files           66       66           
  Lines        10633    10633           
========================================
+ Hits          8478     8479    +1     
+ Misses        2155     2154    -1     
Flag Coverage Δ
cpp 75.71% <ø> (+0.01%) ⬆️
petab 69.59% <ø> (ø)
python 67.61% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/sundials_matrix_wrapper.cpp 83.82% <0.00%> (+0.21%) ⬆️

documentation/python_interface.rst Outdated Show resolved Hide resolved
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sonarcloud bot commented Feb 18, 2021

Kudos, SonarCloud Quality Gate passed!

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
No Duplication information No Duplication information

@dweindl dweindl merged commit 8610931 into develop Feb 18, 2021
@dweindl dweindl deleted the doc_sbml_tags branch February 18, 2021 13:59
@dweindl dweindl mentioned this pull request Feb 19, 2021
dweindl added a commit that referenced this pull request Feb 20, 2021
….13)

Breaking changes:
* AMICI requires Python>=3.7
* Updated package installation (PEP517/518): 
  Creating source distributions requires https://github.com/pypa/build (#1384)
  (but now handles all package building dependencies properly)

Features:
* More flexible state reinitialization (#1417)

Updated dependencies:
* Upgrade to sundials 5.7.0 (#1392)

Fixes:
* Python: account for heaviside functions in expressions (#1382)
* Python: allow loading of existing models in import_petab_problem (#1383)
* Python: Don't override user-provided compiler/linker flags (#1389)
* Python: PEtab import reinitialization fixes (#1417)
* Python: Fix PEtab observables for pysb models (#1390)
* Python: Substitute expressions in event condition expressions (#1404)
* Python: Unspecified initial states in PEtab conditions table default to SBML initial value (#1397)
* C++: Fix timepoint out of bounds access (#1402)
* C++: Fix exported CMake config (#1388)
* Fixed Dockerfile: add python3-venv (#1398, #1408)

Other:
* Slim exported swig interface (#1425)
* Updated documentation
    * Getting started tutorial (#1423)
    * List supported SBML test tags (#1428)
    * Add AMICI C++/Python/Matlab feature comparison (#1409)
    * ...
* Various minor CI improvements
* ...
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2 participants