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  1. HKU-BAL/Clair3 HKU-BAL/Clair3 Public

    Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

    Python 246 27

  2. HKU-BAL/ClairS HKU-BAL/ClairS Public

    ClairS - a deep-learning method for long-read somatic small variant calling

    Python 74 7

  3. HKU-BAL/Clair3-RNA HKU-BAL/Clair3-RNA Public

    Clair3-RNA - a long-read small variant caller for RNA sequencing data

    Python 14 1

  4. Repun Repun Public

    An accurate small variant representation unification method for multiple sequencing platforms

    Python 2 1

  5. HKU-BAL/ClairS-TO HKU-BAL/ClairS-TO Public

    ClairS-TO - a deep-learning method for tumor-only somatic variant calling

    Python 50 3

  6. HKU-BAL/Clair HKU-BAL/Clair Public

    Clair: Exploring the limit of using deep neural network on pileup data for germline variant calling

    Python 104 12