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Explicitly compute TP, FP in val.py (#5727)
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glenn-jocher authored Nov 20, 2021
1 parent eb51ffd commit 36d12a5
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Showing 2 changed files with 16 additions and 7 deletions.
21 changes: 15 additions & 6 deletions utils/metrics.py
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ def fitness(x):
return (x[:, :4] * w).sum(1)


def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names=()):
def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names=(), eps=1e-16):
""" Compute the average precision, given the recall and precision curves.
Source: https://github.com/rafaelpadilla/Object-Detection-Metrics.
# Arguments
Expand All @@ -37,15 +37,15 @@ def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names
tp, conf, pred_cls = tp[i], conf[i], pred_cls[i]

# Find unique classes
unique_classes = np.unique(target_cls)
unique_classes, nt = np.unique(target_cls, return_counts=True)
nc = unique_classes.shape[0] # number of classes, number of detections

# Create Precision-Recall curve and compute AP for each class
px, py = np.linspace(0, 1, 1000), [] # for plotting
ap, p, r = np.zeros((nc, tp.shape[1])), np.zeros((nc, 1000)), np.zeros((nc, 1000))
for ci, c in enumerate(unique_classes):
i = pred_cls == c
n_l = (target_cls == c).sum() # number of labels
n_l = nt[ci] # number of labels
n_p = i.sum() # number of predictions

if n_p == 0 or n_l == 0:
Expand All @@ -56,7 +56,7 @@ def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names
tpc = tp[i].cumsum(0)

# Recall
recall = tpc / (n_l + 1e-16) # recall curve
recall = tpc / (n_l + eps) # recall curve
r[ci] = np.interp(-px, -conf[i], recall[:, 0], left=0) # negative x, xp because xp decreases

# Precision
Expand All @@ -70,7 +70,7 @@ def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names
py.append(np.interp(px, mrec, mpre)) # precision at [email protected]

# Compute F1 (harmonic mean of precision and recall)
f1 = 2 * p * r / (p + r + 1e-16)
f1 = 2 * p * r / (p + r + eps)
names = [v for k, v in names.items() if k in unique_classes] # list: only classes that have data
names = {i: v for i, v in enumerate(names)} # to dict
if plot:
Expand All @@ -80,7 +80,10 @@ def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names
plot_mc_curve(px, r, Path(save_dir) / 'R_curve.png', names, ylabel='Recall')

i = f1.mean(0).argmax() # max F1 index
return p[:, i], r[:, i], ap, f1[:, i], unique_classes.astype('int32')
p, r, f1 = p[:, i], r[:, i], f1[:, i]
tp = (r * nt).round() # true positives
fp = (tp / (p + eps) - tp).round() # false positives
return tp, fp, p, r, f1, ap, unique_classes.astype('int32')


def compute_ap(recall, precision):
Expand Down Expand Up @@ -162,6 +165,12 @@ def process_batch(self, detections, labels):
def matrix(self):
return self.matrix

def tp_fp(self):
tp = self.matrix.diagonal() # true positives
fp = self.matrix.sum(1) - tp # false positives
# fn = self.matrix.sum(0) - tp # false negatives (missed detections)
return tp[:-1], fp[:-1] # remove background class

def plot(self, normalize=True, save_dir='', names=()):
try:
import seaborn as sn
Expand Down
2 changes: 1 addition & 1 deletion val.py
Original file line number Diff line number Diff line change
Expand Up @@ -237,7 +237,7 @@ def run(data,
# Compute metrics
stats = [np.concatenate(x, 0) for x in zip(*stats)] # to numpy
if len(stats) and stats[0].any():
p, r, ap, f1, ap_class = ap_per_class(*stats, plot=plots, save_dir=save_dir, names=names)
tp, fp, p, r, f1, ap, ap_class = ap_per_class(*stats, plot=plots, save_dir=save_dir, names=names)
ap50, ap = ap[:, 0], ap.mean(1) # [email protected], [email protected]:0.95
mp, mr, map50, map = p.mean(), r.mean(), ap50.mean(), ap.mean()
nt = np.bincount(stats[3].astype(np.int64), minlength=nc) # number of targets per class
Expand Down

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