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Merge to_hdf #606

Merged
merged 18 commits into from
Jun 28, 2016
Merged

Merge to_hdf #606

merged 18 commits into from
Jun 28, 2016

Commits on Jun 26, 2016

  1. fixed a problem with the autocomplete on plasma

    @wkerzendorf @ftsamis
    wkerzendorf authored and ftsamis committed Jun 26, 2016
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  2. adds the ability to save the plasma properties to disk now

    @wkerzendorf @ftsamis
    wkerzendorf authored and ftsamis committed Jun 26, 2016
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  3. [TEP002] Add a to_hdf method to the MontecarloRunner (tardis-sn#585) 

    * Add a to_hdf method to the MontecarloRunner.

* Also store nu_bar_estimator and j_estimator in runner's to_hdf

* Document MontecarloRunner.property_to_hdf
    @ftsamis
    ftsamis committed Jun 26, 2016
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  4. Allow filtering of the plasma properties to be stored by to_hdf.

    @ftsamis
    ftsamis committed Jun 26, 2016
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  5. plasma/base.py: Add close_hdf to function call

    @wkerzendorf @ftsamis
    wkerzendorf authored and ftsamis committed Jun 26, 2016
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Commits on Jun 27, 2016

  1. model.py: Change plasma_array attribute to plasma

    @wkerzendorf @ftsamis
    wkerzendorf authored and ftsamis committed Jun 27, 2016
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  2. name change of model.plasma_array to model.plasma

    @wkerzendorf @ftsamis
    wkerzendorf authored and ftsamis committed Jun 27, 2016
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  3. Add a deprecation message for model.plasma_array.

    @ftsamis
    ftsamis committed Jun 27, 2016
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  4. Add a to_hdf method on the Simulation object 

    Add a method to store every iteration of the Simulation
to a specified HDF file.
    @ftsamis
    ftsamis committed Jun 27, 2016
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  5. Add an option to only store the last iteration of the simulation to HDF.

    @ftsamis
    ftsamis committed Jun 27, 2016
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  6. Add a generic to_hdf function to store the different properties.

    @ftsamis
    ftsamis committed Jun 27, 2016
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  7. Add a to_hdf method on Radial1DModel.

    @ftsamis
    ftsamis committed Jun 27, 2016
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  8. Add v_inner, v_outer as Radial1DModel attributes. 

    Store the v_inner, v_outer as model attributes. Furthermore, convert v_middle from a property to an attribute as well
    @ftsamis
    ftsamis committed Jun 27, 2016
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  9. Use io.util.to_hdf to store MontecarloRunner properties

    @ftsamis
    ftsamis committed Jun 27, 2016
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  10. Use io.util.to_hdf to store plasma properties

    @ftsamis
    ftsamis committed Jun 27, 2016
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  11. Add a notebook to demonstrate how storing to HDF works.

    @ftsamis
    ftsamis committed Jun 27, 2016
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  12. Add more examples to the to_hdf jupyter notebook.

    @ftsamis
    ftsamis committed Jun 27, 2016
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  13. Use io.util.to_hdf to store the model.

    @ftsamis
    ftsamis committed Jun 27, 2016
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