[python] Add GHA workflow for minimal CI jobs

.github/workflows/python-ci-full.yml

@@ -0,0 +1,36 @@
+name: TileDB-SOMA Python CI (Full)
+
+on:
+  push:
+    branches: [main]
+  release:
+    types: [published]
+
+jobs:
+  build:
+    strategy:
+      fail-fast: false
+      matrix:
+        # TODO: restore Windows build once we have C++/libtiledbsoma integration supported there
+        os: [ubuntu-22.04, macos-12]
+        # os: [ubuntu-22.04, macos-12, windows-2019]
+        python-version: ['3.7', '3.8', '3.9', '3.10']
+        include:
+          - runs-on: ubuntu-22.04
+            cc: gcc-11
+            cxx: g++-11
+          - runs-on: macos-12
+            cc: gcc-11
+            cxx: g++-11
+    uses: ./.github/workflows/python-ci-single.yml
+    with:
+      os: ${{ matrix.os }}
+      python_version: ${{ matrix.python-version }}
+      cc: ${{ matrix.cc }}
+      cxx: ${{ matrix.cxx }}
+      is_mac: ${{ contains(matrix.os, 'macos') }}
+      report_codecov: ${{ matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9' }}
+      run_lint: ${{ matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9' }}
+    secrets: inherit
+
+

.github/workflows/python-ci-minimal.yml

@@ -0,0 +1,30 @@
+name: TileDB-SOMA Python CI (Minimal)
+
+on:
+  push:
+    paths-ignore:
+      - 'apis/r/**'
+    branches-ignore:
+      - main
+
+jobs:
+  build:
+    strategy:
+      fail-fast: true
+      matrix:
+        os: [ubuntu-22.04]
+        python-version: ['3.10', '3.7']
+        include:
+          - runs-on: ubuntu-22.04
+            cc: gcc-11
+            cxx: g++-11
+    # TODO: remove version before merge to main
+    uses: ./.github/workflows/python-ci-single.yml
+    with:
+      os: ${{ matrix.os }}
+      python_version: ${{ matrix.python-version }}
+      cc: ${{ matrix.cc }}
+      cxx: ${{ matrix.cxx }}
+      report_codecov: ${{ matrix.python-version == '3.10' }}
+      run_lint: ${{ matrix.python-version == '3.10' }}
+    secrets: inherit

.github/workflows/python-ci.yml → .github/workflows/python-ci-single.yml

@@ -1,68 +1,97 @@
+# This is a reusable workflow
+# (https://docs.github.com/en/actions/using-workflows/reusing-workflows#calling-a-reusable-workflow),
+# called by python-ci-full.yml and python-ci-minimal.yml.
+
 name: TileDB-SOMA Python CI
 
 on:
-  pull_request:
-    paths-ignore:
-      - 'apis/r/**'
-  push:
-    branches: [main]
-  release:
-    types: [published]
-
+  workflow_call:
+    inputs:
+      python_version:
+        required: true
+        type: string
+      os: 
+        required: true
+        type: string
+      cc:
+        required: true
+        type: string
+      cxx:
+        required: true
+        type: string
+      report_codecov:
+        required: true
+        type: boolean
+      is_mac: 
+        required: false
+        type: boolean
+        default: false
+      run_lint:
+        required: false
+        type: boolean
+        default: false
+
 jobs:
-  build:
-    runs-on: ${{ matrix.os }}
-    strategy:
-      fail-fast: false
-      matrix:
-        # TODO: restore Windows build once we have C++/libtiledbsoma integration supported there
-        os: [ubuntu-22.04, macos-12]
-        # os: [ubuntu-22.04, macos-12, windows-2019]
-        python-version: ['3.7', '3.8', '3.9', '3.10']
-        include:
-          - runs-on: ubuntu-22.04
-            cc: gcc-11
-            cxx: g++-11
-          - runs-on: macos-12
-            cc: gcc-11
-            cxx: g++-11
+  lint:
+    if: ${{ inputs.run_lint }}
+    runs-on: ${{ inputs.os }}
+    steps:
+    - name: Checkout TileDB-SOMA
+      uses: actions/checkout@v3
+      with:
+        fetch-depth: 0  # ensure we get all tags to inform package version determination
+
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        python-version: ${{ inputs.python_version }}
 
+    - name: Install testing/linting prereqs
+      run: python -m pip -v install -U pip typeguard pre-commit mypy types-setuptools
+
+    # needed for mypy type checking
+    - name: Install tiledbsoma
+      run: python -m pip -v install -e apis/python
+      env:
+        CC: ${{ inputs.cc }}
+        CXX: ${{ inputs.cxx }}
+
+    - name: Run pre-commit hooks on all files
+      run: pre-commit run -a -v
+
+    - name: Check C++ Format
+      run: ./scripts/run-clang-format.sh . clang-format 0 $(find libtiledbsoma -name "*.cc" -or -name "*.h")
+
+  build:
+    runs-on: ${{ inputs.os }}
     steps:
     - name: Select XCode version
+      if: inputs.is_mac
       uses: maxim-lobanov/setup-xcode@v1
       with:
         # Pending https://github.com/actions/runner-images/issues/6350
         xcode-version: '13.4'
-      if: ${{ runner.os == 'macOS' }}
 
     - name: Checkout TileDB-SOMA
       uses: actions/checkout@v3
       with:
         fetch-depth: 0  # ensure we get all tags to inform package version determination
 
-    - name: Set up Python ${{ matrix.python-version }}
+    - name: Set up Python ${{ inputs.python_version }}
       uses: actions/setup-python@v4
       with:
-        python-version: ${{ matrix.python-version }}
+        python-version: ${{ inputs.python_version }}
         cache: pip
         cache-dependency-path: ./apis/python/setup.py
 
     - name: Install testing prereqs
-      run: python -m pip -v install -U pip pytest-cov typeguard
-
-    - name: Run pre-commit hooks on all files
-      if: matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9'
-      run: python -m pip -v install pre-commit && pre-commit run -a -v
-
-    - name: Check C++ Format
-      if: matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9'
-      run: ./scripts/run-clang-format.sh . clang-format 0 $(find libtiledbsoma -name "*.cc" -or -name "*.h")
+      run: python -m pip -v install -U pip pytest-cov typeguard types-setuptools
 
     - name: Install tiledbsoma
       run: python -m pip -v install -e apis/python
       env:
-        CC: ${{ matrix.cc }}
-        CXX: ${{ matrix.cxx }}
+        CC: ${{ inputs.cc }}
+        CXX: ${{ inputs.cxx }}
 
     - name: Show package versions
       run: python scripts/show-versions.py
@@ -86,7 +115,7 @@ jobs:
       run: ctest --test-dir build/libtiledbsoma -C Release --verbose
 
     - name: Report coverage to Codecov
-      if: matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9'
+      if: inputs.report_codecov
       uses: codecov/codecov-action@v3
       with:
         flags: python