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fix: Keep staterror from affecting multiple samples #1965

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merged 10 commits into from
Aug 28, 2022

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lukasheinrich
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@lukasheinrich lukasheinrich commented Aug 27, 2022

Pull Request Description

This PR is supposed to fix the issue w/ staterrors which erroneously affected multiple samples.

  • Would be great to get add. test coverage and cross-checks w/ real world models

@alexander-held @matthewfeickert @kratsg

Checklist Before Requesting Reviewer

  • Tests are passing
  • "WIP" removed from the title of the pull request
  • Selected an Assignee for the PR to be responsible for the log summary

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For the PR Assignees:

  • Summarize commit messages into a comprehensive review of the PR
* Fix staterror bug introduced after v0.6.3 where staterror erroneously affected
  multiple samples.
   - Amends PR #1639 which introduced regression.
   - c.f. Issue #1720
* Remove staterror_combined.__staterror_uncrt as it is unused by the codebase.
* Add test to verify that staterror does not affect more samples than shapesys equivalently.

Co-authored-by: Giordon Stark <[email protected]>

@lukasheinrich lukasheinrich changed the title fix staterror fix: fix staterror Aug 27, 2022
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Would be great to get add. test coverage and cross-checks w/ real world models

👍 From the list in Issue #1945, we should be able to check against Issue #1720.

@kratsg kratsg self-assigned this Aug 27, 2022
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codecov bot commented Aug 27, 2022

Codecov Report

Merging #1965 (3bacc51) into master (d4e1fc2) will decrease coverage by 0.00%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##           master    #1965      +/-   ##
==========================================
- Coverage   98.24%   98.24%   -0.01%     
==========================================
  Files          68       68              
  Lines        4380     4377       -3     
  Branches      728      726       -2     
==========================================
- Hits         4303     4300       -3     
  Misses         45       45              
  Partials       32       32              
Flag Coverage Δ
contrib 26.57% <ø> (+0.01%) ⬆️
doctest 60.56% <ø> (+0.01%) ⬆️
unittests-3.10 96.13% <ø> (-0.01%) ⬇️
unittests-3.7 96.12% <ø> (-0.01%) ⬇️
unittests-3.8 96.16% <ø> (-0.01%) ⬇️
unittests-3.9 96.18% <ø> (-0.01%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/pyhf/modifiers/staterror.py 98.03% <ø> (-0.06%) ⬇️

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Thanks for this fix! Works as intended in the setups I have tested and I did not spot any problems with it.

@matthewfeickert matthewfeickert added the tests pytest label Aug 27, 2022
@matthewfeickert matthewfeickert marked this pull request as ready for review August 28, 2022 06:31
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Thanks @lukasheinrich for this PR and to @kratsg for adding the very nice test! I just have some questions that hopefully have very easy answers that I'm just missing as it is late for me.

(@kratsg As I was the one who originally moved this PR to draft I moved it to ready for review. So we were waiting for me and not Lukas I think.)

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LGTM. 👍 Thanks @lukasheinrich and @kratsg!

Late tonight after I'm done packing I'll try to get Issue #1907 resolved so that we can do a v0.7.0rc2 correctly and then I'll send out a request email for testing and being drafting up the v0.7.0 release notes in PR #1705 so that we can release v0.7.0 early this week.

@matthewfeickert matthewfeickert changed the title fix: fix staterror fix: Keep staterror from affecting multiple samples Aug 28, 2022
@matthewfeickert matthewfeickert merged commit afbc4f3 into master Aug 28, 2022
@matthewfeickert matthewfeickert deleted the staterror_fix branch August 28, 2022 20:12
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staterror regressions blocking v0.7.0 Large cls value difference between v0.6.3 and master
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