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DV.7.1.5+S:M153I (68 seqs, 12 countries, 2.5% Finland) #951

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xz-keg opened this issue Oct 14, 2023 · 11 comments
Closed

DV.7.1.5+S:M153I (68 seqs, 12 countries, 2.5% Finland) #951

xz-keg opened this issue Oct 14, 2023 · 11 comments
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designated FLip = S:L455F / S:F456L S:153 S:444 S:452
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KG.1

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@xz-keg
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xz-keg commented Oct 14, 2023

DV.7.1+A28676G(N:T135A)+G22021T(S:M153I)

GISAID query: A28676G,G22021T
No. of seqs: 9(Spain 5 UK 1 Singapore 1 Portugal 1 Italy 1)

First:EPI_ISL_18168253, Spain, 2023-8-7
Latest: EPI_ISL_18373335, UK, 2023-9-28

usher

image
@FedeGueli FedeGueli added S:452 S:444 FLip = S:L455F / S:F456L S:153 labels Oct 14, 2023
@xz-keg xz-keg changed the title DV.7.1+N:T135A+S:M153I (9 seqs, 5 countries) DV.7.1.5+S:M153I (9 seqs, 5 countries) Oct 16, 2023
@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (9 seqs, 5 countries) DV.7.1.5+S:M153I (14 seqs, 5 countries) Oct 21, 2023
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xz-keg commented Oct 25, 2023

19,France

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (14 seqs, 5 countries) DV.7.1.5+S:M153I (19 seqs, 6 countries) Oct 25, 2023
@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (19 seqs, 6 countries) DV.7.1.5+S:M153I (22 seqs, 6 countries) Oct 30, 2023
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xz-keg commented Nov 4, 2023

27, Finland, Belgium

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (22 seqs, 6 countries) DV.7.1.5+S:M153I (27 seqs, 8 countries) Nov 4, 2023
@FedeGueli
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This seems keeps circualting but not enough to be faster than parental lineage :#951 lets keep it monitored for a while

@xz-keg
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xz-keg commented Nov 10, 2023

31, Croatia, China,

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (27 seqs, 8 countries) DV.7.1.5+S:M153I (31 seqs, 10 countries) Nov 10, 2023
@FedeGueli
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Now it seems faster than parental :https://cov-spectrum.org/explore/Europe/AllSamples/Past3M/variants?nextcladePangoLineage=DV.7.1.5*&nucMutations1=A28676G%2CG22021T&analysisMode=CompareToBaseline& lets monitor it for a while

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (31 seqs, 10 countries) DV.7.1.5+S:M153I (32 seqs, 10 countries) Nov 18, 2023
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xz-keg commented Nov 23, 2023

35, Germany

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (32 seqs, 10 countries) DV.7.1.5+S:M153I (35 seqs, 11 countries) Nov 23, 2023
@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (35 seqs, 11 countries) DV.7.1.5+S:M153I (46 seqs, 11 countries) Nov 27, 2023
@FedeGueli
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1 sample only in November closing it

@FedeGueli FedeGueli closed this as not planned Won't fix, can't repro, duplicate, stale Nov 29, 2023
@FedeGueli
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49 i wrongoed the number of samples coming from November reopening it.

@FedeGueli FedeGueli reopened this Dec 3, 2023
@xz-keg
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xz-keg commented Dec 8, 2023

51, Denmark

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (46 seqs, 11 countries) DV.7.1.5+S:M153I (51 seqs, 12 countries) Dec 8, 2023
@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (51 seqs, 12 countries) DV.7.1.5+S:M153I (52 seqs, 12 countries) Dec 13, 2023
@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (52 seqs, 12 countries) DV.7.1.5+S:M153I (68 seqs, 12 countries) Dec 17, 2023
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xz-keg commented Dec 17, 2023

15/657 in Finland 12/15 batch.

@xz-keg xz-keg changed the title DV.7.1.5+S:M153I (68 seqs, 12 countries) DV.7.1.5+S:M153I (68 seqs, 12 countries, 2.5% Finland) Dec 17, 2023
@FedeGueli FedeGueli added this to the KG.1 milestone Dec 18, 2023
FedeGueli referenced this issue in cov-lineages/pango-designation Dec 18, 2023
@corneliusroemer
Designate KG.1 (DV.7.1.5.1, S:M153I)
c77220a
@FedeGueli
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Designated KG.1 via cov-lineages/pango-designation@c77220a

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