Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

HK.1+Orf1a:V2019I+S:T307I,L455F (41 seqs, 5 countries 4% in NZL 4% Xinjiang) #631

Closed
xz-keg opened this issue Aug 17, 2023 · 11 comments
Closed

HK.1+Orf1a:V2019I+S:T307I,L455F (41 seqs, 5 countries 4% in NZL 4% Xinjiang) #631

xz-keg opened this issue Aug 17, 2023 · 11 comments
Labels
designated FLip = S:L455F / S:F456L
Milestone
HK.1.2

Comments

@xz-keg
Copy link
Contributor

xz-keg commented Aug 17, 2023

HK.1+G6320A(Orf1a:V2019I)+C11704T,C22482T,G22927C(S:T307I,L455F)

GISAID query: C11704T,C22482T,G22927C
No. of seqs: 2(Xinjiang)
EPI_ISL_18108848, 2023-7-4
EPI_ISL_18108876,2023-7-18

usher
image
@FedeGueli
Copy link

Thx

@FedeGueli FedeGueli mentioned this issue Aug 23, 2023
Closed
@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F in China(2 seqs) HK.1+Orf1a:V2019I+S:T307I,L455F in China(4 seqs) Aug 30, 2023
@xz-keg
Copy link
Contributor Author

xz-keg commented Sep 7, 2023

+1 Australia

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F in China(4 seqs) HK.1+Orf1a:V2019I+S:T307I,L455F (5 seqs, 2 countries) Sep 7, 2023
@xz-keg
Copy link
Contributor Author

xz-keg commented Sep 8, 2023

+2 New Zealand

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (5 seqs, 2 countries) HK.1+Orf1a:V2019I+S:T307I,L455F (7 seqs, 3 countries) Sep 8, 2023
@xz-keg
Copy link
Contributor Author

xz-keg commented Sep 9, 2023

+1 UK-CLIMB seq

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (7 seqs, 3 countries) HK.1+Orf1a:V2019I+S:T307I,L455F (8 seqs, 4 countries) Sep 9, 2023
@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (8 seqs, 4 countries) HK.1+Orf1a:V2019I+S:T307I,L455F (10 seqs, 4 countries) Sep 12, 2023
@xz-keg xz-keg mentioned this issue Sep 17, 2023
Closed
@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (10 seqs, 4 countries) HK.1+Orf1a:V2019I+S:T307I,L455F (12 seqs, 4 countries) Sep 20, 2023
@FedeGueli FedeGueli changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (12 seqs, 4 countries) HK.1+Orf1a:V2019I+S:T307I,L455F (21 seqs, 4 countries) Sep 22, 2023
@FedeGueli
Copy link

New batch from New Zealand where it appears to be at 3%

@FedeGueli FedeGueli changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (21 seqs, 4 countries) HK.1+Orf1a:V2019I+S:T307I,L455F (21 seqs, 4 countries 3% in NZL ) Sep 22, 2023
@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (21 seqs, 4 countries 3% in NZL ) HK.1+Orf1a:V2019I+S:T307I,L455F (22 seqs, 4 countries 3% in NZL ) Sep 23, 2023
@xz-keg xz-keg mentioned this issue Sep 27, 2023
Closed
@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (22 seqs, 4 countries 3% in NZL ) HK.1+Orf1a:V2019I+S:T307I,L455F (23 seqs, 4 countries 3% in NZL ) Sep 29, 2023
@FedeGueli FedeGueli changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (23 seqs, 4 countries 3% in NZL ) HK.1+Orf1a:V2019I+S:T307I,L455F (29 seqs, 4 countries 3% in NZL ) Sep 29, 2023
@FedeGueli
Copy link

new upload from XInjiang

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (29 seqs, 4 countries 3% in NZL ) HK.1+Orf1a:V2019I+S:T307I,L455F (29 seqs, 4 countries 3% in NZL 7% Xinjiang) Sep 29, 2023
@xz-keg
Copy link
Contributor Author

xz-keg commented Sep 29, 2023 •
edited
Loading

new upload from XInjiang

7/182=4%, if we count the 9-27 batch and 9-28 batch together.

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (29 seqs, 4 countries 3% in NZL 7% Xinjiang) HK.1+Orf1a:V2019I+S:T307I,L455F (29 seqs, 4 countries 3% in NZL 4% Xinjiang) Sep 29, 2023
@xz-keg
Copy link
Contributor Author

xz-keg commented Sep 30, 2023

+1 Italy

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (29 seqs, 4 countries 3% in NZL 4% Xinjiang) HK.1+Orf1a:V2019I+S:T307I,L455F (30 seqs, 5 countries 3% in NZL 4% Xinjiang) Sep 30, 2023
@xz-keg
Copy link
Contributor Author

xz-keg commented Oct 6, 2023

11/255 in the recent New Zealand batch.

@xz-keg xz-keg changed the title HK.1+Orf1a:V2019I+S:T307I,L455F (30 seqs, 5 countries 3% in NZL 4% Xinjiang) HK.1+Orf1a:V2019I+S:T307I,L455F (41 seqs, 5 countries 4% in NZL 4% Xinjiang) Oct 6, 2023
@FedeGueli FedeGueli added To be proposed Green light for proposal and removed Rapid review needed labels Oct 6, 2023
@FedeGueli
Copy link

Thank you for tracking propose it.

@xz-keg xz-keg mentioned this issue Oct 6, 2023
Closed
@xz-keg xz-keg closed this as completed Oct 6, 2023
@FedeGueli FedeGueli added designated and removed To be proposed Green light for proposal labels Oct 13, 2023
@FedeGueli FedeGueli added this to the HK.1.2 milestone Oct 13, 2023
@FedeGueli
Copy link

Designated HK.1.2 from cov-lineages/pango-designation@2ee937c

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
designated FLip = S:L455F / S:F456L
Projects
None yet
Milestone
HK.1.2
Development

No branches or pull requests
2 participants
@xz-keg @FedeGueli