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FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (61) #247

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FedeGueli opened this issue Jun 24, 2023 · 1 comment
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FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (61) #247

FedeGueli opened this issue Jun 24, 2023 · 1 comment
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Apparently slow It means that a lineage is accumulating sequences slowly not that it is intrinsically slow. New mutations Lineage with an unusual/new/interesting mutation

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@FedeGueli
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Here i want to monitor this sublineage:

FL.2 > >>A1180G> C27110T, Orf1b:P2256S (C20233T)>ORF1a:F1138L(T3677C)>ORF1a:K4192R (A12840G), T13668G

Orf1a:T2158I (C6738T) > S:S256P (T22328C)

Gisaid query: A12840G, T13668G,C6738T,T22328C

Tree:
Schermata 2023-06-24 alle 14 39 47

Schermata 2023-06-24 alle 14 40 12
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice26_genome_test_37f13_547a20.json?label=id:node_6634212

Mini saltation cluster:
Schermata 2023-06-24 alle 14 41 24

Countries:

Schermata 2023-06-24 alle 14 42 23

S:F256P was defining mutation of ER.1 (BQ.1.1.22) (see: cov-lineages/pango-designation#1492)
@FedeGueli FedeGueli changed the title FL.2 with S:S256P with a mini saltation cluster FL.2 with S:S256P with a mini saltation cluster circualting in Australia. Jun 24, 2023
@FedeGueli FedeGueli changed the title FL.2 with S:S256P with a mini saltation cluster circualting in Australia. FL.2 with S:S256P with a mini saltation cluster circulating in Australia. Jun 24, 2023
@FedeGueli FedeGueli added Discussion New mutations Lineage with an unusual/new/interesting mutation labels Jun 24, 2023
@FedeGueli FedeGueli changed the title FL.2 with S:S256P with a mini saltation cluster circulating in Australia. FL.2 with S:S256P with a mini saltation cluster circulating in Australia (56) Jul 2, 2023
@FedeGueli
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FedeGueli commented Jul 2, 2023 •
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56 and exported to Japan, and collected in Us too.
No new sequence from the saltation clauster with S:A352T

@FedeGueli FedeGueli changed the title FL.2 with S:S256P with a mini saltation cluster circulating in Australia (56) FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (56) Jul 2, 2023
@FedeGueli FedeGueli changed the title FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (56) FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (58) Jul 13, 2023
@FedeGueli FedeGueli changed the title FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (58) FL.2 with S:S256P with a mini saltation cluster with S:A352T circulating in Australia (61) Jul 20, 2023
@FedeGueli FedeGueli added Apparently slow It means that a lineage is accumulating sequences slowly not that it is intrinsically slow. and removed Discussion labels Jul 20, 2023
@FedeGueli FedeGueli closed this as not planned Won't fix, can't repro, duplicate, stale Jul 31, 2023
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