Subversion Repository

Many of the curation data file are in a Subversion repository.

Getting a copy of the files

svn checkout svn+ssh://oliver1.sysbiol.cam.ac.uk/var/svn-repos/pombe-embl/trunk pombe-embl

Files and directories in Subversion

Contig files

• chromosome1.contig
• chromosome2.contig
• chromosome3.contig
• mating_type_region.contig
• pMIT.contig
• telomeric.contig

supporting_files/

Mostly contains small PomBase curated data files.

external_data/

External dataset, maintained by PomBase.

mini-ontologies/

Small sub-sets of large ontologies, used by Canto and Chado.