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    42 repositories

    • intronomicon

      Public
      To Be Completed Later
      Python
      •0•0•0•0•Updated Jan 2, 2025Jan 2, 2025

    • setup

      Public
      How to set up your work environment
      Python
      •
      MIT License
      •5•3•0•3•Updated Dec 30, 2024Dec 30, 2024

    • datacore2024

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 23, 2024Dec 23, 2024

    • exam

      Public
      Bioinformatics Exam
      MIT License
      •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

    • genopoeia

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 21, 2024Nov 21, 2024

    • grimoire

      Public
      Biological sequence analysis tools
      Python
      •
      MIT License
      •0•3•11•0•Updated Nov 14, 2024Nov 14, 2024

    • isoforms

      Public
      Python
      •
      MIT License
      •1•1•0•0•Updated Nov 6, 2024Nov 6, 2024

    • genomikon

      Public
      Genomic sequence analysis library & apps
      C
      •
      MIT License
      •0•2•0•0•Updated Jul 26, 2024Jul 26, 2024

    • diseasy

      Public
      HTML
      •
      MIT License
      •0•1•0•0•Updated Jun 12, 2024Jun 12, 2024

    • qalpha

      Public
      Quality Assessment using Alpha Fold DB
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 4, 2024Jun 4, 2024

    • algorithms

      Public
      Python
      •
      MIT License
      •0•2•3•0•Updated May 2, 2024May 2, 2024

    • korflab.github.io

      Public
      0•1•0•0•Updated Mar 11, 2024Mar 11, 2024

    • pelops

      Public
      Probabilistic Evaluation of Local Oligo Patterns in Sequences
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 4, 2024Mar 4, 2024

    • malign

      Public
      Perl
      •
      MIT License
      •0•0•0•0•Updated Feb 26, 2024Feb 26, 2024

    • whichlanguage

      Public
      Some languages are better tuned for certain tasks. But which ones and for which tasks?
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 10, 2024Feb 10, 2024

    • seqxtant

      Public
      Genomic positioning of related sequences
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 15, 2023Nov 15, 2023

    • learning-conda

      Public
      MIT License
      •0•1•0•0•Updated Oct 27, 2023Oct 27, 2023

    • learning-C

      Public
      C
      •
      MIT License
      •0•1•0•0•Updated Oct 21, 2023Oct 21, 2023

    • imeter

      Public
      2022 reboot of IME project
      Python
      •
      MIT License
      •0•3•0•0•Updated Oct 2, 2023Oct 2, 2023

    • u12

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 30, 2023Aug 30, 2023

    • motifamatic

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 28, 2023Apr 28, 2023

    • learning-snakemake

      Public
      Python
      •
      MIT License
      •0•2•0•0•Updated Feb 2, 2023Feb 2, 2023

    • SNAP

      Public
      Gene prediction software
      C
      •
      Other
      •17•60•12•2•Updated Oct 22, 2022Oct 22, 2022

    • monsters

      Public
      Sources, data, and figures for Zhang & Korf 2022
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2022Oct 7, 2022

    • spitfire

      Public
      0•2•0•0•Updated Sep 21, 2022Sep 21, 2022

    • viterbi

      Public
      A programming challenge for fun!
      Python
      •
      The Unlicense
      •0•0•0•0•Updated Aug 13, 2022Aug 13, 2022

    • learning-go

      Public
      MIT License
      •0•1•0•0•Updated Jul 21, 2022Jul 21, 2022

    • genDL

      Public
      Genomic experiments in Deep Learning
      Jupyter Notebook
      •0•1•5•0•Updated Jun 3, 2022Jun 3, 2022

    • documenation

      Public
      Testing various documentation systems
      HTML
      •
      MIT License
      •0•0•0•0•Updated Dec 2, 2021Dec 2, 2021

    • lyman2020

      Public
      Custom scripts for Lyman et al (2020)
      Python
      •0•0•1•0•Updated Oct 8, 2021Oct 8, 2021