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update fapi file name
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KaiWaldrant committed Sep 19, 2024
1 parent c0cbc94 commit 0a01503
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Showing 8 changed files with 10 additions and 10 deletions.
4 changes: 2 additions & 2 deletions src/api/comp_control_method.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,11 +12,11 @@ info:
in the task.
arguments:
- name: --input_train
__merge__: file_train_h5ad.yaml
__merge__: file_train.yaml
required: true
direction: input
- name: --input_test
__merge__: file_test_h5ad.yaml
__merge__: file_test.yaml
required: true
direction: input
- name: --output
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2 changes: 1 addition & 1 deletion src/api/comp_method.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ info:
A denoising method to remove noise (i.e. technical artifacts) from a dataset.
arguments:
- name: --input_train
__merge__: file_train_h5ad.yaml
__merge__: file_train.yaml
required: true
direction: input
- name: --output
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2 changes: 1 addition & 1 deletion src/api/comp_metric.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ info:
A metric for evaluating denoised datasets.
arguments:
- name: "--input_test"
__merge__: file_test_h5ad.yaml
__merge__: file_test.yaml
direction: input
required: true
- name: "--input_prediction"
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4 changes: 2 additions & 2 deletions src/api/comp_process_dataset.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,11 +12,11 @@ arguments:
direction: input
required: true
- name: "--output_train"
__merge__: file_train_h5ad.yaml
__merge__: file_train.yaml
direction: output
required: true
- name: "--output_test"
__merge__: file_test_h5ad.yaml
__merge__: file_test.yaml
direction: output
required: true
test_resources:
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File renamed without changes.
File renamed without changes.
4 changes: 2 additions & 2 deletions src/workflows/process_datasets/config.vsh.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -10,11 +10,11 @@ argument_groups:
- name: Outputs
arguments:
- name: "--output_train"
__merge__: "/src/api/file_train_h5ad.yaml"
__merge__: "/src/api/file_train.yaml"
direction: output
required: true
- name: "--output_test"
__merge__: "/src/api/file_test_h5ad.yaml"
__merge__: "/src/api/file_test.yaml"
direction: output
required: true
resources:
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4 changes: 2 additions & 2 deletions src/workflows/run_benchmark/config.vsh.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -4,11 +4,11 @@ argument_groups:
- name: Inputs
arguments:
- name: "--input_train"
__merge__: "/src/api/file_train_h5ad.yaml"
__merge__: "/src/api/file_train.yaml"
required: true
direction: input
- name: "--input_test"
__merge__: "/src/api/file_test_h5ad.yaml"
__merge__: "/src/api/file_test.yaml"
required: true
direction: input
- name: Outputs
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