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Disabled publishing of version.yml in visualization processes #13

Merged
merged 1 commit into from
Dec 20, 2024
Merged

Disabled publishing of version.yml in visualization processes #13

merged 1 commit into from
Dec 20, 2024

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Felix-Kummer
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The visualization processes still published version.yml files.
This was fixed in this PR.
Consequently, nf-test snapshots had to be updated.

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Warning

Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 3.0.2.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation.

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github-actions bot commented Dec 19, 2024 •
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nf-core pipelines lint overall result: Passed ✅ ⚠️

Posted for pipeline commit c534f93

+| ✅ 202 tests passed       |+
#| ❔   2 tests were ignored |#
!| ❗   4 tests had warnings |!

❗ Test warnings:

  • nextflow_config - Config manifest.version should end in dev: 1.0.0
  • readme - README contains the placeholder zenodo.XXXXXXX. This should be replaced with the zenodo doi (after the first release).
  • pipeline_todos - TODO string in README.md: Add citation for pipeline after first release. Uncomment lines below and update Zenodo doi and badge at the top of this file.
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your preferred methods description, e.g. add publication citation for this pipeline

❔ Tests ignored:

  • files_exist - File is ignored: conf/igenomes.config
  • files_exist - File is ignored: conf/igenomes_ignored.config

✅ Tests passed:

Run details

  • nf-core/tools version 3.0.2
  • Run at 2024-12-19 21:54:31

@Felix-Kummer Felix-Kummer merged commit 7c9e49d into nf-core:dev Dec 20, 2024
6 checks passed
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@jfy133 jfy133 jfy133 approved these changes

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@Felix-Kummer @nf-core-bot @jfy133