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Releases: nextstrain/auspice

Auspice 2.50.0

30 Oct 23:28
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  • Fixed a bug that showed SVG-related errors in the development browser console when viewing a tree in the rectangular layout. (#1714)
  • Added "Data updated" date under the dataset title, in addition to the existing mention in the footer. (#1715)
  • Updated docs on customizing the sidebar style with sidebarTheme. (#1718)

Internal changes which should not result in any different behaviour while using Auspice.

Auspice 2.49.0

28 Sep 00:02
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  • Allow the tip label key to be defined in the JSON via display_defaults.tip_label, in addition to being settable via a URL query.
    See the docs or PR #1668 for more.
  • Tree-specific options in the sidebar are now hidden when the tree panel is not displayed. (#1698)
  • Fixed a bug where the radial trees would have their inner grid circles offset. (#1693)
  • Fixed a bug where SVG export of the entropy panel was invalid. (#1694)

Internal changes which should not result in any different behaviour while using Auspice.

  • Read the Docs build config updated. (#1700)
  • CI improvements. (#1702)

Auspice 2.48.0

31 Aug 00:16
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  • Root sequence data may be inlined in the main dataset JSON
    (Auspice PR #1688 and Augur PR #1295).
  • Bugfix: Fixes a crash when a dataset without the entropy panel attempted to change colorings. (#1691)

Auspice 2.47.0

20 Aug 22:13
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  • Entropy panel now supports more complex genome architectures and has improved styling.
    The JSON schema has been extended to allow segmented CDSs, which allows us to represent CDSs such as those which
    wrap the origin (common in HepB), and those with ribosomal slippage (nCoV, EBOV). The visual representation of CDSs
    now better conveys overlapping CDSs, both in the lower "nav" axis where CDSs are stacked on top of each other and
    in the upper "main" axis where we now view the translations for each CDS individually.
    A number of small genotype-related bugs have also been fixed and the internal representation of the genome streamlined.
    For full details please see #1684, and the schema changes are
    detailed in augur PR #1281.
  • Fixed a bug where metadata TSV download was sometimes empty or incomplete, described in issue #1411.
    (PR #1681)
  • Remove support for Node.js version 14. (#1674)
  • Add support for Node.js version 20. (#1673)

Auspice 2.46.1

12 Jun 02:58
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  • Fix a number of bugs related to continuous traits:
    • Negative (string) values are now correctly interpreted. See issue #1626 and PR #1655 for more.
    • Fix legend matching bounds (used when hovering over legend items). See PR #1657 for more.
  • Dependencies updated. See PR #1669 for more.

Auspice 2.46.0

15 May 23:19
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  • Fixed a bug where narratives with multiple datasets that had measurements panels would error when switching datasets. (#1603)

There have been a number of internal changes with this release, most of which should not result in any different behavior while using Auspice.

  • Add basic TypeScript support (#1450)
  • Minor dev docs updates (#1660)
  • Overhaul of ESLint rules (#1665)

Auspice 2.45.2

21 Mar 20:30
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  • Fixed a bug for continuous color scales where tips with values of zero wouldn't appear on legend-hover or in the frequencies panel.
    See PR #1643 for more.
  • Fixed a bug where downloaded TSVs may have unescaped quotes which resulted in incorrect parsing.
    See PR #1649 for more.
  • Minor documentation updates. See PR #1638 for more.

Auspice 2.45.1

14 Mar 18:58
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  • Small improvements to Auspice documentation (#1588)

Auspice 2.45.0

08 Mar 18:13
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  • Remove support for Node.js version 12. (#1560)
  • Add support for Node.js version 18 and NPM version 9. (#1560)

Auspice 2.44.0

02 Mar 20:15
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