feat(nf-tencentcloud): first commit of adding nf-tencentcloud plugin #91
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nf-tencentcloud is a nextflow plugin designed to add Tencent Cloud Object storage and Tencent Healthcare Omics Platform executor adaptation support to the nextflow workflow engine. Its design goal is to extend Tencent Cloud's native support for Nextflow workflows, allowing users to run Nextflow workflows using Tencent Cloud resources in a simple and easy-to-use manner.
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Nice! |
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@lalalacampanella by the way, we moved our TES executor into a plugin and upgraded it to TES 1.1: https://github.com/nextflow-io/nf-ga4gh You probably can't fully reuse it if you're adding a bunch of custom stuff, but it might be helpful as a reference |
Thank you for the reminder! We will seriously consider it |
jealous
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This release includes the support for the `scratch` option. For s3 storage, allow the user to authorize with session token. It also includes several bugfixes. See the details below. What's Changed: * [nextflow-ioGH-75] Too many `put xxx into map` log by @jealous in MemVerge/nf-float#76 * [nextflow-ioGH-77] Support s3 token authorization by @jealous in MemVerge/nf-float#78 * [nextflow-ioGH-77] Update the readme for s3 token by @jealous in MemVerge/nf-float#79 * [nextflow-ioGH-69] Support `float` in `ext` directive`. by @jealous in MemVerge/nf-float#80 * [nextflow-ioGH-63] Ignore the time limit by default. by @jealous in MemVerge/nf-float#81 * [nextflow-ioGH-82] Enable concurrent stage in by @jealous in MemVerge/nf-float#84 * [nextflow-ioGH-82] Default disk size to 6 GB. by @jealous in MemVerge/nf-float#85 * [FLOAT-4502] Avoid using plain credential. by @jealous in MemVerge/nf-float#86 * [GH-87] Log parsing error for job ID by @jealous in MemVerge/nf-float#88 * [nextflow-ioGH-89] Use default disk size of MMC by @jealous in MemVerge/nf-float#90 * [nextflow-ioGH-91] default file stage in strategy to copy by @jealous in MemVerge/nf-float#92 **Full Changelog**: MemVerge/nf-float@0.4.3...0.4.4
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pditommaso
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Sep 12, 2024
This release includes the support for the `scratch` option. For s3 storage, allow the user to authorize with session token. It also includes several bugfixes. See the details below. What's Changed: * [GH-75] Too many `put xxx into map` log by @jealous in MemVerge/nf-float#76 * [GH-77] Support s3 token authorization by @jealous in MemVerge/nf-float#78 * [GH-77] Update the readme for s3 token by @jealous in MemVerge/nf-float#79 * [GH-69] Support `float` in `ext` directive`. by @jealous in MemVerge/nf-float#80 * [GH-63] Ignore the time limit by default. by @jealous in MemVerge/nf-float#81 * [GH-82] Enable concurrent stage in by @jealous in MemVerge/nf-float#84 * [GH-82] Default disk size to 6 GB. by @jealous in MemVerge/nf-float#85 * [FLOAT-4502] Avoid using plain credential. by @jealous in MemVerge/nf-float#86 * [GH-87] Log parsing error for job ID by @jealous in MemVerge/nf-float#88 * [GH-89] Use default disk size of MMC by @jealous in MemVerge/nf-float#90 * [GH-91] default file stage in strategy to copy by @jealous in MemVerge/nf-float#92 **Full Changelog**: MemVerge/nf-float@0.4.3...0.4.4
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nf-tencentcloud is a nextflow plugin designed to add Tencent Cloud Object storage and Tencent Healthcare Omics Platform executor adaptation support to the nextflow workflow engine.
Its design goal is to extend Tencent Cloud's native support for Nextflow workflows, allowing users to run Nextflow workflows using Tencent Cloud resources in a simple and easy-to-use manner.