Siemens NonlinearGradientCorrection (rordenlab/dcm2niix#597)

neurolabusc · Aug 4, 2022 · 8e60556 · 8e60556
1 parent aa82e56
commit 8e60556
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Showing 8 changed files with 40 additions and 16 deletions.
diff --git a/Ref/DCM2NIIX_regression_test_4.json b/Ref/DCM2NIIX_regression_test_4.json
@@ -3,7 +3,6 @@
 	"MagneticFieldStrength": 3,
 	"ImagingFrequency": 127.697,
 	"Manufacturer": "GE",
-	"PulseSequenceName": "epiRT",
 	"InternalPulseSequenceName": "EPI",
 	"ManufacturersModelName": "DISCOVERY MR750",
 	"InstitutionName": "NIH FMRIF",
@@ -18,6 +17,7 @@
 	"ScanningSequence": "EP\\GR",
 	"SequenceVariant": "SS",
 	"ScanOptions": "EPI_GEMS\\PFF",
+	"PulseSequenceName": "epiRT",
 	"ImageType": ["ORIGINAL", "PRIMARY", "EPI", "NONE"],
 	"SeriesNumber": 4,
 	"AcquisitionTime": "11:48:15.000000",
@@ -29,6 +29,11 @@
 	"RepetitionTime": 5,
 	"FlipAngle": 60,
 	"PhaseEncodingPolarityGE": "Unflipped",
+	"ShimSetting": [
+		3,
+		4,
+		-12	],
+	"PrescanReuseString": "TG/s3,RN/s1",
 	"CoilString": "32Ch Head",
 	"PercentPhaseFOV": 100,
 	"PercentSampling": 100,
@@ -63,5 +68,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/DCM2NIIX_regression_test_5.json b/Ref/DCM2NIIX_regression_test_5.json
@@ -3,7 +3,6 @@
 	"MagneticFieldStrength": 3,
 	"ImagingFrequency": 127.697,
 	"Manufacturer": "GE",
-	"PulseSequenceName": "epiRT",
 	"InternalPulseSequenceName": "EPI",
 	"ManufacturersModelName": "DISCOVERY MR750",
 	"InstitutionName": "NIH FMRIF",
@@ -18,6 +17,7 @@
 	"ScanningSequence": "EP\\GR",
 	"SequenceVariant": "SS",
 	"ScanOptions": "EPI_GEMS\\PFF",
+	"PulseSequenceName": "epiRT",
 	"ImageType": ["ORIGINAL", "PRIMARY", "EPI", "NONE"],
 	"SeriesNumber": 5,
 	"AcquisitionTime": "11:52:24.000000",
@@ -29,6 +29,11 @@
 	"RepetitionTime": 5,
 	"FlipAngle": 60,
 	"PhaseEncodingPolarityGE": "Unflipped",
+	"ShimSetting": [
+		3,
+		5,
+		-12	],
+	"PrescanReuseString": "TG/s3,RN/s1",
 	"CoilString": "32Ch Head",
 	"PercentPhaseFOV": 100,
 	"PercentSampling": 100,
@@ -63,5 +68,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/DCM2NIIX_regression_test_6.json b/Ref/DCM2NIIX_regression_test_6.json
@@ -3,7 +3,6 @@
 	"MagneticFieldStrength": 3,
 	"ImagingFrequency": 127.697,
 	"Manufacturer": "GE",
-	"PulseSequenceName": "epiRT",
 	"InternalPulseSequenceName": "EPI",
 	"ManufacturersModelName": "DISCOVERY MR750",
 	"InstitutionName": "NIH FMRIF",
@@ -18,6 +17,7 @@
 	"ScanningSequence": "EP\\GR",
 	"SequenceVariant": "SS",
 	"ScanOptions": "EPI_GEMS\\PFF",
+	"PulseSequenceName": "epiRT",
 	"ImageType": ["ORIGINAL", "PRIMARY", "EPI", "NONE"],
 	"SeriesNumber": 6,
 	"AcquisitionTime": "11:54:18.000000",
@@ -29,6 +29,11 @@
 	"RepetitionTime": 5,
 	"FlipAngle": 60,
 	"PhaseEncodingPolarityGE": "Unflipped",
+	"ShimSetting": [
+		4,
+		5,
+		-11	],
+	"PrescanReuseString": "TG/s3,RN/s1",
 	"CoilString": "32Ch Head",
 	"PercentPhaseFOV": 100,
 	"PercentSampling": 100,
@@ -63,5 +68,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/DCM2NIIX_regression_test_7.json b/Ref/DCM2NIIX_regression_test_7.json
@@ -3,7 +3,6 @@
 	"MagneticFieldStrength": 3,
 	"ImagingFrequency": 127.697,
 	"Manufacturer": "GE",
-	"PulseSequenceName": "epiRT",
 	"InternalPulseSequenceName": "EPI",
 	"ManufacturersModelName": "DISCOVERY MR750",
 	"InstitutionName": "NIH FMRIF",
@@ -18,6 +17,7 @@
 	"ScanningSequence": "EP\\GR",
 	"SequenceVariant": "SS",
 	"ScanOptions": "EPI_GEMS\\PFF",
+	"PulseSequenceName": "epiRT",
 	"ImageType": ["ORIGINAL", "PRIMARY", "EPI", "NONE"],
 	"SeriesNumber": 7,
 	"AcquisitionTime": "11:55:51.000000",
@@ -29,6 +29,11 @@
 	"RepetitionTime": 5,
 	"FlipAngle": 60,
 	"PhaseEncodingPolarityGE": "Unflipped",
+	"ShimSetting": [
+		4,
+		6,
+		-11	],
+	"PrescanReuseString": "TG/s3,RN/s1",
 	"CoilString": "32Ch Head",
 	"PercentPhaseFOV": 100,
 	"PercentSampling": 100,
@@ -63,5 +68,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/EPI_PE=AP_3.json b/Ref/EPI_PE=AP_3.json
@@ -6,7 +6,7 @@
 	"ManufacturersModelName": "Skyra",
 	"InstitutionName": "NIH",
 	"InstitutionalDepartmentName": "FMRIF 3TD",
-	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20",
+	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20892",
 	"DeviceSerialNumber": "45160",
 	"StationName": "AWP45160",
 	"BodyPartExamined": "BRAIN",
@@ -21,6 +21,7 @@
 	"ScanOptions": "FS",
 	"SequenceName": "epfid2d1_72",
 	"ImageType": ["ORIGINAL", "PRIMARY", "M", "ND", "ECHO", "00", "MOSAIC"],
+	"NonlinearGradientCorrection": false,
 	"SeriesNumber": 3,
 	"AcquisitionTime": "12:24:58.102500",
 	"AcquisitionNumber": 1,
@@ -79,5 +80,5 @@
 	"ImageOrientationText": "Tra",
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/EPI_PE=LR_6.json b/Ref/EPI_PE=LR_6.json
@@ -6,7 +6,7 @@
 	"ManufacturersModelName": "Skyra",
 	"InstitutionName": "NIH",
 	"InstitutionalDepartmentName": "FMRIF 3TD",
-	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20",
+	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20892",
 	"DeviceSerialNumber": "45160",
 	"StationName": "AWP45160",
 	"BodyPartExamined": "BRAIN",
@@ -21,6 +21,7 @@
 	"ScanOptions": "FS",
 	"SequenceName": "epfid2d1_72",
 	"ImageType": ["ORIGINAL", "PRIMARY", "M", "ND", "ECHO", "00", "MOSAIC"],
+	"NonlinearGradientCorrection": false,
 	"SeriesNumber": 6,
 	"AcquisitionTime": "12:30:2.285000",
 	"AcquisitionNumber": 1,
@@ -79,5 +80,5 @@
 	"ImageOrientationText": "Tra",
 	"InPlanePhaseEncodingDirectionDICOM": "ROW",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/EPI_PE=PA_4.json b/Ref/EPI_PE=PA_4.json
@@ -6,7 +6,7 @@
 	"ManufacturersModelName": "Skyra",
 	"InstitutionName": "NIH",
 	"InstitutionalDepartmentName": "FMRIF 3TD",
-	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20",
+	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20892",
 	"DeviceSerialNumber": "45160",
 	"StationName": "AWP45160",
 	"BodyPartExamined": "BRAIN",
@@ -21,6 +21,7 @@
 	"ScanOptions": "FS",
 	"SequenceName": "epfid2d1_72",
 	"ImageType": ["ORIGINAL", "PRIMARY", "M", "ND", "ECHO", "00", "MOSAIC"],
+	"NonlinearGradientCorrection": false,
 	"SeriesNumber": 4,
 	"AcquisitionTime": "12:26:54.517500",
 	"AcquisitionNumber": 1,
@@ -79,5 +80,5 @@
 	"ImageOrientationText": "Tra",
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }
diff --git a/Ref/EPI_PE=RL_5.json b/Ref/EPI_PE=RL_5.json
@@ -6,7 +6,7 @@
 	"ManufacturersModelName": "Skyra",
 	"InstitutionName": "NIH",
 	"InstitutionalDepartmentName": "FMRIF 3TD",
-	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20",
+	"InstitutionAddress": "10 Center Drive Building 10 Room B1D307,Bethesda--,Maryland,US,20892",
 	"DeviceSerialNumber": "45160",
 	"StationName": "AWP45160",
 	"BodyPartExamined": "BRAIN",
@@ -21,6 +21,7 @@
 	"ScanOptions": "FS",
 	"SequenceName": "epfid2d1_72",
 	"ImageType": ["ORIGINAL", "PRIMARY", "M", "ND", "ECHO", "00", "MOSAIC"],
+	"NonlinearGradientCorrection": false,
 	"SeriesNumber": 5,
 	"AcquisitionTime": "12:28:12.085000",
 	"AcquisitionNumber": 1,
@@ -79,5 +80,5 @@
 	"ImageOrientationText": "Tra",
 	"InPlanePhaseEncodingDirectionDICOM": "ROW",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20211006"
+	"ConversionSoftwareVersion": "v1.0.20220720"
 }