Context menus

Contig

• Reverse – Reverse compliment the contig

• Remove – Remove the contig from the canvas

• Duplicate – Duplicate the contig

• Details – Bring up details about the contigs length, GC content, skew, coverage and edges

• to/fr – Bring up a menu that allows the user to highlight edges. Also allows the user to add, duplicate or move contigs attached to the 3’ end of the selected contig (to) or the 5’ end (fr)

Blast

• Query/Subject

  • Move – Move to query/subject so it is aligns with its match

  • Goto – Move to the query or subject

  • Write – Write the aligned query or subject sequence to a FASTA file

• Remove – Remove the hit

• Details – Show details about the hit such as identity, mismatches etc.

• To back/front – Move the blast hit to the back or front of the canvas

• Highlight – Outline the hit with a specific colour