Decrease reliance on yq

[turbomam]

Any use of yq should be compact, general and well-documented. It should not be used to apply name-based modifications which can be handled by sheets_and_friends' modifications_and_validation script.

Currently, the validation updates specified by the --validation_config_tsv argument are only triggered when detecting

• specified slot ranges
• specified slot string_serializations

and only take these actions:

• overwriting a slot's pattern
• overwriting a slot's DH datatype... which is just a type range as an xsd CURIE?

I don't think the DH datatype changes are necessary any more, as class ranges are generally replaced by the yq operations, and DH seems to understand the range specifications that consist of a linkml:type in name alone.

I would like to continue using yq for these general validation updates, or add additional trigger types to modifications_and_validation.

cc @pkalita-lbl

[turbomam]

see also

• remove un-used schemasheets and sheets_and_friends TSVs #38

[mslarae13]

Does this relate to microbiomedata/nmdc-schema#1846 ??
@sierra-moxon