Merge pull request #277 from microbiomedata/275-implement-a-docker-ba… #167
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| name: Auto-deployment of nmdc_submission_schema documentation and DH interface | |
| on: | |
| push: | |
| branches: [ main ] | |
| jobs: | |
| build-docs: | |
| # TODO: this should probably be split into separate build and deploy jobs to | |
| # reduce privileged token exposure | |
| permissions: | |
| pages: write # to deploy to Pages | |
| id-token: write # to verify the deployment originates from an appropriate source | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@main | |
| with: | |
| fetch-depth: 0 # otherwise, you will failed to push refs to dest repo | |
| - name: Set up Python 3. | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: 3.9 | |
| - name: Install Poetry. | |
| uses: snok/[email protected] | |
| - name: Install Node.js | |
| uses: actions/setup-node@v3 | |
| with: | |
| node-version: 16 | |
| - name: Install yq | |
| env: | |
| YQ_VERSION: v4.30.5 | |
| YQ_BINARY: yq_linux_amd64 | |
| run: | | |
| mkdir -p $HOME/.local/bin | |
| wget https://github.com/mikefarah/yq/releases/download/$YQ_VERSION/$YQ_BINARY.tar.gz -O - | tar xz && mv $YQ_BINARY $HOME/.local/bin/yq | |
| echo "$HOME/.local/bin" >> $GITHUB_PATH | |
| - name: Install Python dependencies. | |
| run: poetry install -E docs | |
| - name: Install JavaScript dependencies. | |
| working-directory: data_harmonizer | |
| run: npm install | |
| - name: Regenerate schema | |
| run: | | |
| make \ | |
| clean \ | |
| schema-clean \ | |
| src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml \ | |
| ingest-triad \ | |
| project/json/nmdc_submission_schema.json | |
| - name: Build documentation. | |
| run: | | |
| poetry run gen-doc -d docs src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml | |
| cp src/docs/*md docs/ | |
| poetry run mkdocs build -d dist | |
| - name: Build DataHarmonizer interface. | |
| working-directory: data_harmonizer | |
| run: | | |
| npm run build -- --outDir ../dist/_playground --base /${{ github.event.repository.name }}/_playground/ | |
| - name: Upload artifact | |
| uses: actions/upload-pages-artifact@v1 | |
| with: | |
| path: dist | |
| - name: Deploy to GitHub Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v1 |