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microbiomedata / nmdc-ontology Public

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Issue 4: Genererate json file for Kitware#5

Merged

wdduncan merged 42 commits intomainmicrobiomedata/nmdc-ontology:mainfrom issue-4microbiomedata/nmdc-ontology:issue-4Copy head branch name to clipboard

Aug 17, 2021

+647,674-420,694

Conversation Commits42 (42)Checks Files changed

Commits

Commits on Aug 12, 2021

use nmdc-merged.owl to build nmdc-merged.ttl
wdduncan
committed
update comment
wdduncan
committed
update components
wdduncan
committed
create relation graph with labels
wdduncan
committed

Commits on Aug 13, 2021

add --reflexive-subclasses false to generation of relation graph; and remove uneeded targets
wdduncan
committed
upate relation graph using --reflexive-subclasses false
wdduncan
committed
add sparql query to retrieve all the labels
wdduncan
committed
add nmdco-relation-graph.ttl
wdduncan
committed
add nmdco-relation-graph.ttl
wdduncan
committed
change nmdco-rg.ttl to nmdco-relation-graph.ttl
wdduncan
committed
fix typo
wdduncan
committed
remove odkvesion target
wdduncan
committed
update files in repo
wdduncan
committed
update release artifacts to include relation-graph; not sure if this has any affect
wdduncan
committed
remove nmdco-base target; not needed since this is not an obo ontology
wdduncan
committed
use owl version of relation-graph instead of ttl
wdduncan
committed

Commits on Aug 16, 2021

rename subset-files to subsets; rework relation graph
wdduncan
committed
add subset targets
wdduncan
committed
change ttl to owl
wdduncan
committed
add subsets on src/ontology directory
wdduncan
committed
adding po and envo to imports
wdduncan
committed
removing components file; seems confusing
wdduncan
committed
rename imports
wdduncan
committed
update catalog
wdduncan
committed
remove ontology version IRIs from imports; they were causing problems
wdduncan
committed
remov duplicate imports/ro_import.owl
wdduncan
committed
remove components
wdduncan
committed
Somehow I duplicated the top part of the Makefile in the lower part of the Makefile!!!
wdduncan
committed

Commits on Aug 17, 2021

remove terms files
wdduncan
committed
remove ro import, the domains and ranges in ro result (correctly) in reasoning errors
wdduncan
committed
re-adding ro import
wdduncan
committed
re-adding ro import
wdduncan
committed
re-adding ro import
wdduncan
committed
testing make all
wdduncan
committed
testing make release
wdduncan
committed
add json
wdduncan
committed
add classes only json
wdduncan
committed
clean up makefile
wdduncan
committed
add messages when building targets; add sparql file dependencies
wdduncan
committed
regenerate artifacts
wdduncan
committed
add json
wdduncan
committed
remove unwanted json
wdduncan
committed

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