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Extend schema to cover metaproteomics output to enable search by compound #169

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cmungall opened this issue Dec 4, 2020 · 4 comments
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@cmungall
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cmungall commented Dec 4, 2020

Rough example from @SamuelPurvine here:

https://github.com/microbiomedata/nmdc-metadata/blob/master/scratch/metaproteomics-example-Sam.json

NOTE: for now, make comments on @dehays google doc https://docs.google.com/document/d/15fga30d619WRxAUk8LyrojwIN1m89_K-sIrmUg4Y3tY/edit rather that commenting in ticket. We will still use this ticket to track status

cmungall added a commit that referenced this issue Dec 4, 2020
@cmungall cmungall added the schema label Dec 4, 2020
@dehays
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dehays commented Dec 10, 2020

@SamuelPurvine will iterate with @cmungall @wdduncan and @dehays on structure and content. @anubhav0fnu will modify the script that produces JSON once he has returned (Congratulations!) in January.

cmungall added a commit that referenced this issue Dec 17, 2020
@cmungall cmungall changed the title Extend schema to cover metaproteomics output Extend schema to cover metaproteomics output to enable search by compound Dec 17, 2020
SamuelPurvine added a commit that referenced this issue Jan 5, 2021
incremental change #169
@anubhav0fnu
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@SamuelPurvine will iterate with @cmungall @wdduncan and @dehays on structure and content. @anubhav0fnu will modify the script that produces JSON once he has returned (Congratulations!) in January.

thank you @dehays, yes, I'll do it asap, I'm working with Sam on it.

@wdduncan
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@dehays @SamuelPurvine
Trying to clean up some tickets now that GSP has passed. Can we close this ticket?

@dehays
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dehays commented Mar 30, 2021

metaP analysis activity schema changes and JSON produced for GSP studies - closing issue

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5 participants