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Added error free BAMs, optimized read processing and functions #35
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Add support for error-free BAMs
farchaab
changed the title
Optimized read processing and functions
Added error free BAMs, optimized read processing and functions
Nov 1, 2024
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Summary
PR to add error free BAMS, remove redundant rules and simplify functions
Features
--errfree
parameter to resolve Error-free reads? #32 (thanks @teojcryan !)Changes
cat_fastqs
messageFixes
fix_art_sam
in favor of 0 length indel to fix CIGAR and query sequence are of different length with art_illumina #22