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updated README
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farchaab committed Oct 11, 2024
2 parents 975e0f7 + 3dc4635 commit e4500e1
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8 changes: 2 additions & 6 deletions README.md
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Expand Up @@ -52,6 +52,8 @@ abundances["abundances
(sequence, taxonomic)"] --> depth
end
style community_design color:#15161a
style community_design color:#15161a
fasta --> simulator
depth --> simulator
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#### :bar_chart: Resources usage


On average, using `samples.tsv` (see [table](#arrow_right-input)), MeSS runs in under 2min, while using around 1.8GB of physical RAM



| task_id | hash | native_id | name | status | exit | submit | duration | realtime | %cpu | peak_rss | peak_vmem | rchar | wchar |
| ------- | --------- | --------- | -------- | --------- | ---- | ----------------------- | -------- | -------- | ------ | -------- | --------- | ------ | ------ |
| 1 | fe/03c2bc | 62286 | MESS (1) | COMPLETED | 0 | 2024-09-04 12:41:15.820 | 1m 50s | 1m 50s | 111.5% | 1.8 GB | 9 GB | 3.5 GB | 2.4 GB |
Expand All @@ -152,11 +151,8 @@ On average, using `samples.tsv` (see [table](#arrow_right-input)), MeSS runs in


> [!NOTE]
> Average resources usage measured 3 times with one CPU (within a [nextflow](https://github.com/nextflow-io/nextflow) process)
>
> Resources usage was measured exluding dependencies deployement time (conda env creation or container pulling)

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