renamed output, moved to processing

metagenlab · May 15, 2024 · d418233 · d418233
1 parent 1d0f7df
commit d418233
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/mess/workflow/rules/processing/fastas.smk b/mess/workflow/rules/processing/fastas.smk
@@ -42,9 +42,9 @@ if FASTA and not ASM_SUMMARY:
 checkpoint split_contigs:
     input:
         fa=list_fastas,
-        cov=os.path.join(dir.out.base, "cov.tsv"),
+        cov=os.path.join(dir.out.processing, "coverages.tsv"),
     output:
-        tsv=os.path.join(dir.out.processing, "split.tsv"),
+        tsv=os.path.join(dir.out.processing, "cov.tsv"),
         dir=directory(os.path.join(dir.out.processing, "split")),
     resources:
         mem_mb=config.resources.sml.mem,