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add manifest
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farchaab committed Dec 16, 2024
1 parent 19eb10d commit 871f937
Showing 1 changed file with 32 additions and 23 deletions.
55 changes: 32 additions & 23 deletions nextflow.config
Original file line number Diff line number Diff line change
@@ -1,36 +1,45 @@
manifest {
name = 'metagenlab/MeSS-figures'
author = """Farid Chaabane, Trestan Pillonel, Claire Bertelli"""
homePage = 'https://github.com/metagenlab/MeSS-figures'
description = """Supplementary figures and scripts for the MeSS paper"""
mainScript = 'main.nf'
nextflowVersion = '!>=24.04.4'
version = '1.0'
}

params {
ext = "{R1,R2}"
ext = "{R1,R2}"
}

apptainer {
enabled = true
autoMounts = true
cacheDir = "containers"
enabled = true
autoMounts = true
cacheDir = "containers"
}

process {
withLabel:process_single {
cpus = 1
memory = 1.GB
time = 1.h
withLabel: process_single {
cpus = 1
memory = 1.GB
time = 1.h
}
withLabel:process_low {
cpus = 2
memory = 12.GB
time = 2.h
withLabel: process_low {
cpus = 2
memory = 12.GB
time = 2.h
}
withLabel:process_medium {
cpus = 6
memory = 36.GB
time = 6.h
withLabel: process_medium {
cpus = 6
memory = 36.GB
time = 6.h
}
withLabel:process_high {
cpus = 16
memory = 80.GB
time = 10.h
withLabel: process_high {
cpus = 16
memory = 80.GB
time = 10.h
}
withLabel:process_high_memory {
memory = 200.GB
withLabel: process_high_memory {
memory = 200.GB
}
}

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