Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix architecture name in network diagram script #86

Merged
merged 3 commits into from
Jun 13, 2024
Merged

Fix architecture name in network diagram script #86

Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
56b4618
fix architecture name
ziw-liu Jun 12, 2024
84d5ff4
add boxes to the diagram
ziw-liu Jun 12, 2024
ca85a07
deleting some extra redundant lines
edyoshikun Jun 12, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
19 changes: 7 additions & 12 deletions viscy/scripts/network_diagram.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -46,7 +46,7 @@
# %%
# 3D->2D
model = VSUNet(
architecture="UNext2",
architecture="UNeXt2",
model_config={
"in_channels": 2,
"out_channels": 3,
Expand All @@ -61,17 +61,18 @@
model_graph = draw_graph(
model,
model.example_input_array,
graph_name="UNext2",
graph_name="UNeXt2",
roll=True,
depth=3,
expand_nested=True,
)

model_graph.visual_graph

# %%
# 3D->3D
model = VSUNet(
architecture="UNext2",
architecture="UNeXt2",
model_config={
"in_channels": 1,
"out_channels": 2,
Expand All @@ -85,9 +86,10 @@
model_graph = draw_graph(
model,
model.example_input_array,
graph_name="UNext2",
graph_name="UNeXt2",
roll=True,
depth=3,
expand_nested=True,
)

model_graph.visual_graph
Expand Down Expand Up @@ -118,15 +120,8 @@
graph_name="VSCyto2D",
roll=True,
depth=3,
expand_nested=True,
)

fcmae = model_graph.visual_graph
fcmae

# %%

model_graph.visual_graph.render(
format="svg",
)

# %%
Loading