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This commit is a roll-up reversion of the following commits (PR): * This reverts commit a79e879 (Qiskit#10977) * This reverts commit ba161e9 (Qiskit#10974) * This reverts commit 50e8137 (Qiskit#10944) This is being done to clear the 1.0 branch of memory-owning `expr.Var` variables and `Store` instructions. It should be re-applied once 1.0 is released. The individual reverts had conflicts, since various other large-scale changes include wrap-ups of the changes to be reverted. This reversion should have handled all that, and other places where standalone `Var` nodes were referenced (such as in "See also" sections), even if not used.
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