add pre-commits

[ocefpaf]

Just codespell, that will be useful in the gh-pages, large files, and link check.

Closes #256

[ocefpaf]

We need to enable pre-commit-ci first. I don't have my GH key with me now to do it. @MathewBiddle I'll do this later today but if you want to give it a go you can navigate to https://results.pre-commit.ci/ and add this repo to the list of the ones we run pre-commit-ci.

BTW, the last two commits are thanks to running these pre-commits. You will probably find the link checker quite useful in other non-sphinx IOOS sites.

     - repo: https://github.com/tcort/markdown-link-check
       rev: v3.11.2
       hooks:
         - id: markdown-link-check
           args: [-q]

[ocefpaf]

Looks like the link checker is not working on pre-commit-ci :-/

[MathewBiddle]

Do I need to enable something? I never looked into it yesterday.

[ocefpaf]

Do I need to enable something? I never looked into it yesterday.

Nope. I did it this morning. BTW, this is the report on the gh-pages:

  [✖] https://github.com/ioos/glider-dac-catalog → Status: 404
  [✖] https://github.com/ioos/glider_dac_thredds_catalog%3E → Status: 404
  [✖] http://www.ioos.noaa.gov/observing/observing_assets/glider_asset_map.html → Status: 404
  [✖] https://gliders.ioos.us/metadata-erddap/ → Status: 404
  [✖] https://gliders.ioos.us/metadata-thredds/ → Status: 404
  [✖] http://www.ndbc.noaa.gov/gliders.php → Status: 404
  [✖] https://raw.githubusercontent.com/kerfoot/ioosngdac/master/doco/IOOS-DAC-architecture.png → Status: 404
  [✖] #What-is-the-current-procedure-for-sending-data-to-the-Global-Telecommunications-System-(GTS) → Status: 404
  [✖] http://cfconventions.org/standard-names.html → Status: 404
  [✖] http://www.apl.washington.edu/project/project.php?id=seaglider#:~:text=The%20AUV%20Seaglider%20is%20the,time%20via%20satellite%20data%20telemetry. → Status: 0
  [✖] http://www.apl.washington.edu/ → Status: 0
  [✖] http://www.onr.navy.mil/ → Status: 0
  [✖] http://www.bluefinrobotics.com/products/spray-glider/ → Status: 404
  [✖] http://www.webbresearch.com/slocumglider.aspx → Status: 0
  [✖] http://www.webbresearch.com/ → Status: 0
  [✖] ngdac-netcdf-file-format-version-2.html → Status: 400
  [✖] /ioosngdac/glider-sampling-terminology.png → Status: 400
  [✖] ngdac-netcdf-file-format-version-2.html → Status: 400
  [✖] https://compliance.ioos.us/index.html → Status: 502
  [✖] /ioosngdac/ngdac-netcdf-file-submission-process.html#new-deployment-registration → Status: 400
  [✖] http://www.unidata.ucar.edu/software/thredds/current/tds/ → Status: 404
  [✖] /ioosngdac/ngdac-netcdf-file-submission-process.html → Status: 400
  [✖] http://www.unidata.ucar.edu/software/thredds/current/tds/TDS.html → Status: 404
  [✖] http://cfconventions.org/standard-names.html → Status: 404
  [✖] http://www.wmo.int/pages/prog/amp/mmop/wmo-number-rules.html → Status: 404
  [✖] /ioosngdac/useful-links → Status: 400
  [✖] ngdac-netcdf-file-format-version-2.html#description--examples-of-required-global-attributes → Status: 400
  [✖] ngdac-netcdf-file-format-version-2.html#platform → Status: 400
  [✖] ngdac-netcdf-file-format-version-2.html#trajectory → Status: 400
  [✖] ngdac-netcdf-file-submission-process.html#dataset-archiving → Status: 400
  [✖] ngdac-netcdf-file-format-version-2.html#file-naming-conventions → Status: 400
  [✖] /ioosngdac/ngdac-architecture.html#data-assembly-center-architecture → Status: 400
  [✖] https://compliance.ioos.us/index.html → Status: 502
  [✖] /ioosngdac/DAC_providers_your_deployments.png → Status: 400
  [✖] /ioosngdac/DAC_complete_deployment.png → Status: 400
  [✖] http://www.wmo.int/pages/prog/www/TEM/GTS/index_en.html → Status: 404
  [✖] /ioosngdac/ngdac-netcdf-file-format-version-2.html → Status: 400
  [✖] glider-background-and-sampling-terminology.html#sampling-pattern-terminology → Status: 400
  [✖] http://www.unidata.ucar.edu/software/thredds/current/tds/TDS.html → Status: 404
  [✖] /ioosngdac/IOOS-DAC-architecture.png → Status: 400
  [✖] http://www.ndbc.noaa.gov/gliders.php → Status: 404
  [✖] www.osmc.info → Status: 400

I'll try to fix a few buy going forward it would be nice to fix the pre-commit-ci. I'm in contact with upstream to figure this out.

[ocefpaf]

The pre-commit version of this check is too fast and return valid links as Status: 0, which are not necessarily dead but sometimes just slow. The GHA action is a bit more roust though and will allow for more flexible configs in the future. This one is ready to go!

[MathewBiddle]

Just one comment on the GHA.

[MathewBiddle]

Thanks. Looks good