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Upgrade dependencies (34.0) #4909

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66 tasks done
reckart opened this issue Jun 27, 2024 · 0 comments
Closed
66 tasks done

Upgrade dependencies (34.0) #4909

reckart opened this issue Jun 27, 2024 · 0 comments
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@reckart
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reckart commented Jun 27, 2024

Describe the refactoring action
Update dependencies.

  • asciidoctor 2.5.12 -> 2.5.13
  • asciidoctor-diagram 2.3.0 -> 2.3.1
  • asciidoctor-pdf 2.3.15 -> 2.3.18
  • assertj 3.26.0 -> 3.26.3
  • awaitility 4.3.1 -> 4.2.2
  • byte-buddy 1.14.17 -> 1.14.19
  • commons-codec 1.17.0 -> 1.17.1
  • commons-dbcp2 2.11.0 -> 2.12.0
  • commons-lang3 3.13.0 -> 3.16.0
  • dayjs 1.11.10 -> 1.11.13
  • dkpro-core 2.4.0 -> 2.5.0
  • esbuild 0.20.2 -> 0.23.1
  • esbuild-sass-plugin 3.2.0 -> 3.3.1
  • esbuild-svelte 0.8.0 -> 0.8.2
  • eslint 8.57.0 -> 8.57.1
  • eslint-plugin-import 2.29.1 -< 2.30.0
  • eslint-plugin-promise 6.1.1 -> 6.6.0
  • eslint-plugin-svelte 2.37.0 -> 2.44.0
  • fastutil 8.5.13 -> 8.5.14
  • font-awesome 5.15.4 -> 6.5.2
  • groovy 4.0.21 -> 4.0.22
  • hibernate 5.6.15 -> 6.5.2
  • hibernate-validator 6.2.5 -> 6.2.5
  • jackson 2.17.1 -> 2.17.2
  • jaxb 2.3.9 -> 4.0.5
  • jboss-logging 3.5.3 -> 3.6.0
  • jena 4.6.1 -> 5.1.0
  • jetty 12.0.11 -> 12.0.12
  • jgit 6.9.0.202403050737-r -> 6.10.0.202406032230-r
  • jjwt 0.12.5 -> 0.12.6
  • jna 5.13.0 -> 5.14.0
  • json-schema-validator 1.4.0 -> 1.5.1
  • jsoup 1.16.1 -> 1.18.1
  • junit 5.10.2 -> 5.11.0
  • junit-platform 1.10.2 -> 1.11.0
  • liquibase-slf4j -> 5.0.0
  • lucene 8.11.3 -> 9.11.1
  • mariadb-driver 2.7.12 -> 3.4.1
  • mime4j 0.8.10 -> 0.8.11
  • mysql-driver 8.0.27 -> 9.0.0
  • nimbus-jose-jwt 9.39.3 -> 9.40
  • opensearch 1.3.13 -> 2.16.0
  • pdfbox 2.0.30 -> 3.0.3
  • sentry 6.34.0 -> 7.14.0
  • servlet-api 4.0.1 -> 6.0.0
  • slf4j 2.0.13 -> 2.0.16
  • snakeyaml 1.33 -> 2.2
  • snappy 1.1.10.5 -> 1.1.10.6
  • solr 8.11.3 -> 9.6.1
  • spring 5.3.37 -> 6.1.12
  • spring-boot 2.7.18 -> 3.3.2
  • spring-data 2.7.18 -> 3.3.2
  • spring-security 5.8.12 -> 6.3.1
  • springdoc 1.8.0 -> 2.6.0
  • svelte-vite-plugin-svelte 3.1.0 -> 3.1.2
  • svgdotjs-svg-js 3.2.0 -> 3.2.4
  • testcontainers 1.19.8 -> 1.20.1
  • tomcat 9.0.90 -> 10.1.28
  • vitest 1.5.0 -> 2.1.1
  • wicket 9.18.0 -> 10.1.0
  • wicket-bootstrap 6.0.5 -> 7.0.5
  • wicket-jquery-selectors 3.0.6 -> 4.0.5
  • wicket-spring-boot 3.1.6 -> 4.0.0
  • wicket-webjars 3.0.7 -> 4.0.4
  • wicketstuff 9.18.0 -> 10.1.1
  • woodstox-core 6.6.2 -> 6.7.0

Expected benefit
Bug fixes and improvements.

@reckart reckart added this to the 34.0 milestone Jun 27, 2024
@reckart reckart self-assigned this Jun 27, 2024
reckart added a commit that referenced this issue Jun 27, 2024
- WicketStuff Core 10.1.0 -> 10.1.1
reckart added a commit that referenced this issue Jun 27, 2024
- Exclude jcl-over-log4j, commons-logging and commons-logging-api in favor of spring-jcl
- liquibase-slf4j -> 5.0.0
reckart added a commit that referenced this issue Jun 28, 2024
- Exclude jcl-over-log4j, commons-logging and commons-logging-api in favor of spring-jcl
- liquibase-slf4j -> 5.0.0
reckart added a commit that referenced this issue Jun 28, 2024
- Exclude jcl-over-log4j, commons-logging and commons-logging-api in favor of spring-jcl
- liquibase-slf4j -> 5.0.0
- Remove Wicket Webjars workaround for bug in WicketStuff 10.1.0
- Remove/exclude dependencies on all commons-logging stuff except spring-jcl
reckart added a commit that referenced this issue Jun 28, 2024
- Exclude jcl-over-log4j, commons-logging and commons-logging-api in favor of spring-jcl
- liquibase-slf4j -> 5.0.0
- Remove Wicket Webjars workaround for bug in WicketStuff 10.1.0
- Remove/exclude dependencies on all commons-logging stuff except spring-jcl
reckart added a commit that referenced this issue Jun 28, 2024
- Exclude jcl-over-log4j, commons-logging and commons-logging-api in favor of spring-jcl
- liquibase-slf4j -> 5.0.0
- Remove Wicket Webjars workaround for bug in WicketStuff 10.1.0
- Remove/exclude dependencies on all commons-logging stuff except spring-jcl
- Route liquibase logging through SLF4J
reckart added a commit that referenced this issue Jun 28, 2024
reckart added a commit that referenced this issue Jul 3, 2024
…de-to-proper-curation-page

* main: (24 commits)
  #4919 - Unable to import project with knowledge-based exported by INCEpTION 33.0 (again)
  #4921 - Constraints do not work properly when rules are distributed over multiple rulesets
  #4915 - Support for MySQL 8
  #4051 - Postgres support
  #3407 - Remove old database migrations that seem to get always executed
  #3407 - Remove old database migrations that seem to get always executed
  #4909 - Upgrade dependencies
  #4911 - No results when searching as curator after re-indexing project
  #4909 - Upgrade dependencies
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.1
  #4901 - Consider document structure when splitting sentences in custom XML formats
  #4880 - Upgrade dependencies
  #4898 - Unable to import project with knowledge-based exported by INCEpTION 33.0
  #4896 - Ability to search for additional languages in knowledge-base
  No issue: Trim LLM responses
  #4892 - Curation sidebar state not cleared when logging out
  #4891 - Exception in sidebar curation mode when document-level annotations exist
  #4727 - Switching between editors can cause the old and the new editors to be loaded and initialized
  #4889 - Document sometimes not rendered in by-line brat render modes
  ...

% Conflicts:
%	inception/inception-ui-annotation/src/main/java/de/tudarmstadt/ukp/clarin/webanno/ui/annotation/AnnotationPage.java
reckart added a commit that referenced this issue Jul 3, 2024
…de-to-proper-curation-page

* main: (24 commits)
  #4919 - Unable to import project with knowledge-based exported by INCEpTION 33.0 (again)
  #4921 - Constraints do not work properly when rules are distributed over multiple rulesets
  #4915 - Support for MySQL 8
  #4051 - Postgres support
  #3407 - Remove old database migrations that seem to get always executed
  #3407 - Remove old database migrations that seem to get always executed
  #4909 - Upgrade dependencies
  #4911 - No results when searching as curator after re-indexing project
  #4909 - Upgrade dependencies
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.1
  #4901 - Consider document structure when splitting sentences in custom XML formats
  #4880 - Upgrade dependencies
  #4898 - Unable to import project with knowledge-based exported by INCEpTION 33.0
  #4896 - Ability to search for additional languages in knowledge-base
  No issue: Trim LLM responses
  #4892 - Curation sidebar state not cleared when logging out
  #4891 - Exception in sidebar curation mode when document-level annotations exist
  #4727 - Switching between editors can cause the old and the new editors to be loaded and initialized
  #4889 - Document sometimes not rendered in by-line brat render modes
  ...

% Conflicts:
%	inception/inception-ui-annotation/src/main/java/de/tudarmstadt/ukp/clarin/webanno/ui/annotation/AnnotationPage.java
reckart added a commit that referenced this issue Jul 30, 2024
- junit 5.10.2 -> 5.10.3
- junit-platform 1.10.2 -> 1.10.3
- spring 6.1.8 -> 6.1.11
- spring-boot 3.3.0 -> 3.3.2
- spring-data 3.2.4 -> 3.3.2
- spring-security 6.3.0 -> 6.3.1
- springdoc 1.8.0 -> 2.6.0
- jjwt 0.12.5 -> 0.12.6
- jboss-logging 3.5.3 -> 3.6.0
- assertj 3.26.0 -> 3.26.3
- testcontainers 1.19.8 -> 1.20.0
- tomcat 10.1.24 -> 10.1.26
- jetty 12.0.11 -> 12.0.12
- mysql-driver 8.0.27 -> 8.0.33
- hibernate-validator
- lucene 9.10.0 -> 9.11.1
- opensearch 2.14.0 -> 2.15.0
- asciidoctor 2.5.12 -> 2.5.13
- asciidoctor-diagram 2.3.0 -> 2.3.1
- asciidoctor-pdf 2.3.15 -> 2.3.17
- jackson 2.17.1 -> 2.17.2
- byte-buddy 1.14.17 -> 1.14.8
- commons-lang3 3.14.0 -> 3.15.0
- commons-codec 1.17.0 -> 1.17.1
- commons-dbcp2 2.11.0 -> 2.12.0
- jgit 6.9.0.202403050737-r -> 6.10.0.202406032230-r
- json-schema-validator 1.4.0 -> 1.5.1
- fastutil 8.5.13 -> 8.5.14
- woodstox-core 6.6.2 -> 6.7.0
- nimbus-jose-jwt 9.39.3 -> 9.40
reckart added a commit that referenced this issue Jul 30, 2024
- groovy 4.0.21 -> 4.0.22
- sentry 6.34.0 -> 7.12.1
- mariadb-driver 2.7.12 -> 3.4.1
- mysql-driver 8.0.33 -> 9.0.0
- lucene 9.11.1 -> 9.10.0
- font-awesome 5.15.4 -> 6.5.2
- jaxb 2.3.9 -> 4.0.5
- jna 5.13.0 -> 5.14.0
reckart added a commit that referenced this issue Jul 30, 2024
…ade-dependencies

#4909 - Upgrade dependencies (34.0)
reckart added a commit that referenced this issue Aug 4, 2024
- dkpro-core 2.4.0 -> 2.5.0
reckart added a commit that referenced this issue Aug 4, 2024
@reckart reckart added this to Kanban Aug 7, 2024
@reckart reckart moved this to 🔖 To do in Kanban Aug 7, 2024
reckart added a commit that referenced this issue Aug 17, 2024
- junit 5.10.3 -> 5.11.0
- testcontainers 1.20.0 -> 1.20.1
- awaitility 4.3.1 -> 4.2.2
- pdfbox 3.0.2 -> 3.0.3
- spring 6.1.11 -> 6.1.12
- slf4j 2.0.13 -> 2.0.16
- sentry 7.12.1 -> 7.14.0
- tomcat 10.1.26 -> 10.1.28
- opensearch 2.15.0 -> 2.16.0
- asciidoctorj-pdf 2.3.17 -> 2.3.18
- byte-buddy 1.14.18 -> 1.14.19
- commons-lang3 3.13.0 -> 3.16.0
- snappy 1.1.10.5 -> 1.1.10.6
- mime4j 0.8.10 -> 0.8.11
reckart added a commit that referenced this issue Aug 17, 2024
- junit 5.10.3 -> 5.11.0
- testcontainers 1.20.0 -> 1.20.1
- awaitility 4.3.1 -> 4.2.2
- pdfbox 3.0.2 -> 3.0.3
- spring 6.1.11 -> 6.1.12
- slf4j 2.0.13 -> 2.0.16
- sentry 7.12.1 -> 7.14.0
- tomcat 10.1.26 -> 10.1.28
- opensearch 2.15.0 -> 2.16.0
- asciidoctorj-pdf 2.3.17 -> 2.3.18
- byte-buddy 1.14.18 -> 1.14.19
- commons-lang3 3.13.0 -> 3.16.0
- snappy 1.1.10.5 -> 1.1.10.6
- mime4j 0.8.10 -> 0.8.11
- lucene 9.10.0 -> 9.11.1
reckart added a commit that referenced this issue Aug 17, 2024
@reckart reckart closed this as completed Sep 7, 2024
@github-project-automation github-project-automation bot moved this from 🔖 To do to 🍹 Done in Kanban Sep 7, 2024
reckart added a commit that referenced this issue Sep 18, 2024
- dayjs 1.11.10 -> 1.11.13
- esbuild 0.20.2 -> 0.23.1
- esbuild-sass-plugin 3.2.0 -> 3.3.1
- esbuild-svelte 0.8.0 -> 0.8.2
- eslint 8.57.0 -> 8.57.1
- eslint-plugin-import 2.29.1 -< 2.30.0
- eslint-plugin-promise 6.1.1 -> 6.6.0
- eslint-plugin-svelte 2.37.0 -> 2.44.0
- svelte-preprocess 5.1.4 -> 6.0.2
- svelte-vite-plugin-svelte 3.1.0 -> 3.1.2
- svgdotjs-svg-js 3.2.0 -> 3.2.4
- vitest 1.5.0 -> 2.1.1
- Update package-lock files
reckart added a commit that referenced this issue Sep 18, 2024
reckart added a commit that referenced this issue Sep 21, 2024
- svelte-preprocess 6.0.2 -> 5.1.4
reckart added a commit that referenced this issue Sep 21, 2024
reckart added a commit that referenced this issue Sep 21, 2024
- svelte-preprocess 6.0.2 -> 5.1.4

(cherry picked from commit 235ac1f)
reckart added a commit that referenced this issue Sep 21, 2024
* main:
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  No issue: Cosmetic improvements to login page and telemetry settings
  #4909 - Upgrade dependencies
  #5052 - No lazy details when viewing annotation suggestions for another user
  No issue: Cosmetic improvements to login page and telemetry settings
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5050 - Tags on the second level of conditional features cannot be selected
  #5033 - Ability to configure recommenders interactively on the annotation page
  #4977 - Clean up Knowledge Base UI code

% Conflicts:
%	inception/inception-bom/pom.xml
reckart added a commit that referenced this issue Sep 21, 2024
* main:
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  No issue: Cosmetic improvements to login page and telemetry settings
  #4909 - Upgrade dependencies
  #5052 - No lazy details when viewing annotation suggestions for another user
  No issue: Cosmetic improvements to login page and telemetry settings
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5050 - Tags on the second level of conditional features cannot be selected
  #5033 - Ability to configure recommenders interactively on the annotation page
  #4977 - Clean up Knowledge Base UI code

% Conflicts:
%	inception/inception-bom/pom.xml
reckart added a commit that referenced this issue Sep 21, 2024
reckart added a commit that referenced this issue Sep 21, 2024
* release/34.x:
  #4909 - Upgrade dependencies
reckart added a commit that referenced this issue Oct 1, 2024
…ases

* main: (110 commits)
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-34.0
  No issue: Mention MS SQL and PosgreSQL as experimental DB options
  No issue: Fix versions after merge
  #5043 - Ability to specify token breaking zones when calling tokenizer
  #5064 - Project template for PHI annotation
  #5071 - Better document which layers are supported by which formats
  #5061 - Multiple synchronous recommenders only the last one wins
  #5064 - Project template for PHI annotation
  #5068 - Show annotation sidebar by default
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5066 - Increase default number of rows for brat editors
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  ...
reckart added a commit that referenced this issue Oct 1, 2024
…-JSON

* main: (308 commits)
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-34.0
  No issue: Mention MS SQL and PosgreSQL as experimental DB options
  No issue: Fix versions after merge
  #5043 - Ability to specify token breaking zones when calling tokenizer
  #5064 - Project template for PHI annotation
  #5071 - Better document which layers are supported by which formats
  #5061 - Multiple synchronous recommenders only the last one wins
  #5064 - Project template for PHI annotation
  #5068 - Show annotation sidebar by default
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5066 - Increase default number of rows for brat editors
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  ...

% Conflicts:
%	inception/inception-schema/src/main/java/de/tudarmstadt/ukp/inception/schema/exporters/LayerExporter.java
%	inception/inception-schema/src/main/java/de/tudarmstadt/ukp/inception/schema/exporters/TagSetExporter.java
%	inception/inception-ui-project/src/main/java/de/tudarmstadt/ukp/clarin/webanno/ui/project/layers/LayerDetailForm.java
%	inception/inception-ui-project/src/main/java/de/tudarmstadt/ukp/clarin/webanno/ui/project/layers/ProjectLayersPanel.java
reckart added a commit that referenced this issue Oct 1, 2024
* main: (30 commits)
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-34.0
  No issue: Mention MS SQL and PosgreSQL as experimental DB options
  No issue: Fix versions after merge
  #5043 - Ability to specify token breaking zones when calling tokenizer
  #5064 - Project template for PHI annotation
  #5071 - Better document which layers are supported by which formats
  #5061 - Multiple synchronous recommenders only the last one wins
  #5064 - Project template for PHI annotation
  #5068 - Show annotation sidebar by default
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5066 - Increase default number of rows for brat editors
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  ...
reckart added a commit that referenced this issue Oct 1, 2024
…he-Annotator-editor

* main: (330 commits)
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-34.0
  No issue: Mention MS SQL and PosgreSQL as experimental DB options
  No issue: Fix versions after merge
  #5043 - Ability to specify token breaking zones when calling tokenizer
  #5064 - Project template for PHI annotation
  #5071 - Better document which layers are supported by which formats
  #5061 - Multiple synchronous recommenders only the last one wins
  #5064 - Project template for PHI annotation
  #5068 - Show annotation sidebar by default
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5066 - Increase default number of rows for brat editors
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  ...
reckart added a commit that referenced this issue Oct 1, 2024
…causes-problems-in-search

* main: (32 commits)
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-34.0
  No issue: Mention MS SQL and PosgreSQL as experimental DB options
  No issue: Fix versions after merge
  #5043 - Ability to specify token breaking zones when calling tokenizer
  #5064 - Project template for PHI annotation
  #5071 - Better document which layers are supported by which formats
  #5061 - Multiple synchronous recommenders only the last one wins
  #5064 - Project template for PHI annotation
  #5068 - Show annotation sidebar by default
  #5033 - Ability to configure recommenders interactively on the annotation page
  #5066 - Increase default number of rows for brat editors
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  #5056 - Ability to configure additional languages for knowledge bases
  #4909 - Upgrade dependencies
  No issue: Actually, document-metadata doesn't seem to be experimental after all...
  No issue: Set version to 35.0-SNAPSHOT
  [maven-release-plugin] prepare for next development iteration
  [maven-release-plugin] prepare release inception-33.7
  ...

% Conflicts:
%	inception/inception-ui-project/src/main/java/de/tudarmstadt/ukp/clarin/webanno/ui/project/layers/ProjectLayersPanel.html
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