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Describe how to use ELK to process Snomed before import #4560

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reckart opened this issue Feb 25, 2024 · 0 comments
Closed

Describe how to use ELK to process Snomed before import #4560

reckart opened this issue Feb 25, 2024 · 0 comments
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⭐️ Enhancement New feature or request Module: Knowledge Base
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31.2

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reckart commented Feb 25, 2024

Is your feature request related to a problem? Please describe.
When loading the Snomed OFN file into INCEpTION, certain concepts with multiple parents do not appear in the concept tree.

Describe the solution you'd like
Describe a process using the ELK reasoner to generate subClassOf statements from the OWL axioms in the ontology. INCEpTION can then properly locate the concepts in the concept tree.
@reckart reckart added this to the 31.2 milestone Feb 25, 2024
@reckart reckart self-assigned this Feb 25, 2024
reckart added a commit that referenced this issue Feb 25, 2024
@reckart
#4560 - Describe how to use ELK to process Snomed before import
6748f9a 
- Add recommendation to use ELK to generate missing statements and to enable the read-only mode
@reckart reckart closed this as completed Feb 26, 2024
reckart added a commit that referenced this issue Feb 26, 2024
@reckart
Merge pull request #4561 from inception-project/feature/4560-Describe…
45d35e9 
…-how-to-use-ELK-to-process-Snomed-before-import

#4560 - Describe how to use ELK to process Snomed before import
reckart added a commit that referenced this issue Feb 26, 2024
@reckart
Merge branch 'release/31.x'
3b19c9f 
* release/31.x:
  #4560 - Describe how to use ELK to process Snomed before import

% Conflicts:
%	inception/inception-kb/src/main/resources/de/tudarmstadt/ukp/inception/kb/yaml/knowledgebase-profiles.yaml
reckart added a commit that referenced this issue Feb 26, 2024
@reckart
Merge branch 'main' into refactoring/4558-Better-verification-for-fea…
4bc22f3 
…ture-names

* main:
  #4560 - Describe how to use ELK to process Snomed before import
  #4513 - Support full text search in knowledge bases running on Blazegraph
  #4550 - Clean up code
@reckart reckart added this to Kanban Aug 7, 2024
@reckart reckart moved this to 🍹 Done in Kanban Aug 7, 2024
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⭐️ Enhancement New feature or request Module: Knowledge Base
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@reckart