Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

feat: support for Apple M1 silicon #227

Merged
merged 8 commits into from
Aug 26, 2024
Merged

feat: support for Apple M1 silicon #227

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
8 commits
Select commit Hold shift + click to select a range
fd8aa0b
add test for m1 Apple silicon
aryarm Aug 22, 2024
1365fd4
update to latest versions of dev dependencies
aryarm Aug 22, 2024
539cfbf
update to latest bcftools
aryarm Aug 22, 2024
7d02eeb
use the latest build of art
aryarm Aug 22, 2024
02e46a2
delete build num which is platform specific
aryarm Aug 22, 2024
c3e9545
allow nox to use the latest bcftools
aryarm Aug 22, 2024
863f34c
Merge branch 'master' into ci/macos-14
nicholema Aug 26, 2024
0c3dd35
Merge branch 'master' into ci/macos-14
aryarm Aug 26, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions .github/workflows/tests.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,6 +22,7 @@ jobs:
- { python: "3.12", os: "ubuntu-latest", session: "tests" }
# - { python: "3.11", os: "windows-latest", session: "tests" }
- { python: "3.8", os: "macos-13", session: "tests" }
- { python: "3.9", os: "macos-latest", session: "tests" }
- { python: "3.8", os: "ubuntu-latest", session: "size" }
- { python: "3.8", os: "ubuntu-latest", session: "coverage" }

Expand Down
8 changes: 4 additions & 4 deletions dev-env.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,12 +4,12 @@ channels:
- nodefaults
dependencies:
- conda-forge::python=3.8 # the lowest version of python that we formally support
- conda-forge::pip==23.3.2
- bioconda::bcftools==1.19
- conda-forge::pip==24.0
- bioconda::bcftools==1.20
- bioconda::art==2016.06.05
- conda-forge::poetry==1.8.3 # keep in sync with release.yml
- conda-forge::nox==2023.04.22
- conda-forge::poetry-plugin-export==1.6.0
- conda-forge::nox==2024.4.15
- conda-forge::poetry-plugin-export==1.8.0
- pip:
- nox-poetry==1.0.3
- poetry-conda==0.1.1
2 changes: 1 addition & 1 deletion noxfile.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -47,7 +47,7 @@ def tests(session: Session) -> None:
"""Run the test suite."""
session.conda_install(
"art",
"bcftools==1.19",
"bcftools",
channel="bioconda",
)
session.conda_install(
Expand Down
Loading