Changes to support building R-keras and dependencies on POWER9 #9544

edmondac · 2019-12-18T14:39:15Z

(created using eb --new-pr)

This requires:

…ort.cgi?bug=946836

edmondac · 2019-12-18T21:09:41Z

Patch for R base 3.6.2 from https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=946836

edmondac · 2019-12-19T08:48:16Z

config.guess from http://git.savannah.gnu.org/gitweb/?p=config.git;a=blob_plain;f=config.guess;hb=HEAD

edmondac · 2019-12-19T12:02:10Z

I took the config.guess from the easybuild ConfigureMake sources

boegelbot · 2019-12-20T13:53:12Z

Travis test report: 2/2 runs failed - see https://travis-ci.org/easybuilders/easybuild-easyconfigs/builds/627723995

Only showing partial log for 1st failed test suite run 18994.1;
full log at https://travis-ci.org/easybuilders/easybuild-easyconfigs/jobs/627723996

...
ERROR: test__parse_easyconfig_Mesa-19.1.7-GCCcore-8.3.0.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for parsing of easyconfig Mesa-19.1.7-GCCcore-8.3.0.eb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "<string>", line 1, in innertest
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 745, in template_easyconfig_test
    ecs = process_easyconfig(spec)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test__parse_easyconfig_Mesa-19.2.1-GCCcore-8.3.0.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for parsing of easyconfig Mesa-19.2.1-GCCcore-8.3.0.eb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "<string>", line 1, in innertest
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 745, in template_easyconfig_test
    ecs = process_easyconfig(spec)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.2.1-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 413, in test_dep_versions_per_toolchain_generation
    self.process_all_easyconfigs()
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 119, in process_all_easyconfigs
    EasyConfigTest.ordered_specs = resolve_dependencies(EasyConfigTest.parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/tools/robot.py", line 436, in resolve_dependencies
    processed_ecs = process_easyconfig(path, validate=not retain_all_deps, hidden=hidden)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test_sanity_check_paths (test.easyconfigs.easyconfigs.EasyConfigTest)
Make sure specified sanity check paths adher to the requirements.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 476, in test_sanity_check_paths
    self.process_all_easyconfigs()
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 119, in process_all_easyconfigs
    EasyConfigTest.ordered_specs = resolve_dependencies(EasyConfigTest.parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/tools/robot.py", line 436, in resolve_dependencies
    processed_ecs = process_easyconfig(path, validate=not retain_all_deps, hidden=hidden)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
FAIL: test_changed_files_pull_request (test.easyconfigs.easyconfigs.EasyConfigTest)
Specific checks only done for the (easyconfig) files that were changed in a pull request.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 713, in test_changed_files_pull_request
    self.assertTrue(False, error_msg)
AssertionError: Failed to find parsed easyconfig for Mesa-19.1.7-GCCcore-8.3.0.eb (and could not isolate it in easyconfigs archive either)

----------------------------------------------------------------------
Ran 8851 tests in 280.340s

FAILED (failures=1, errors=4)
ERROR: Not all tests were successful.

*bleep, bloop, I'm just a bot (boegelbot v20180813.01)*Please talk to my owner @boegel if you notice you me acting stupid),or submit a pull request to https://github.com/boegel/boegelbot fix the problem.

edmondac · 2019-12-20T15:07:54Z

R builds on POWER9 now, with the exception of extensions OpenCL and gpuR - which require the OpenCL headers and library. On Intel they ship in CUDA, but the CUDA ppc64le .run file doesn't include OpenCL. I'm talking to IBM about where we should get OpenCL on ppc64le...

branfosj · 2019-12-20T18:49:18Z

cdeterman/gpuR#81 suggest to use pocl (http://portablecl.org/) on ppc64le. So updating https://github.com/easybuilders/easybuild-easyconfigs/blob/develop/easybuild/easyconfigs/p/pocl/pocl-1.3-GCC-8.2.0-2.31.1.eb may take us forward.

zao · 2019-12-22T19:17:14Z

@edmondac By "Intel" do you mean actual Intel as in not even on AMD processors, or just regular old boring x86-64?

It's hard to tell at a glance which one you is meant when skimming through the quite rapid feed of EasyBuild mails.

branfosj · 2019-12-31T10:27:53Z

@edmondac #9593 adds pocl 1.4. I've done a test with the CUDA version and it allows the gpuR and OpenCL extensions to install.

The log shows the following at the end of installing gpuR, which is certainly encouraging:

** testing if installed package can be loaded from final location
Number of platforms: 1
- platform: The pocl project: OpenCL 1.2 pocl 1.4, RelWithDebInfo, LLVM 9.0.1, RELOC, SLEEF, CUDA, POCL_DEBUG
  - context device index: 0
    - pthread-POWER9, altivec supported
  - context device index: 1
    - Tesla V100-SXM2-16GB
checked all devices
completed initialization

edmondac · 2020-01-06T09:46:24Z

@edmondac By "Intel" do you mean actual Intel as in not even on AMD processors, or just regular old boring x86-64?

Sorry, I mean x86-64

boegelbot · 2020-01-06T10:20:08Z

Travis test report: 2/2 runs failed - see https://travis-ci.org/easybuilders/easybuild-easyconfigs/builds/633212341

Only showing partial log for 1st failed test suite run 19162.1;
full log at https://travis-ci.org/easybuilders/easybuild-easyconfigs/jobs/633212342

...
ERROR: test__parse_easyconfig_Mesa-19.1.7-GCCcore-8.3.0.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for parsing of easyconfig Mesa-19.1.7-GCCcore-8.3.0.eb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "<string>", line 1, in innertest
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 746, in template_easyconfig_test
    ecs = process_easyconfig(spec)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test__parse_easyconfig_Mesa-19.2.1-GCCcore-8.3.0.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for parsing of easyconfig Mesa-19.2.1-GCCcore-8.3.0.eb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "<string>", line 1, in innertest
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 746, in template_easyconfig_test
    ecs = process_easyconfig(spec)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.2.1-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 413, in test_dep_versions_per_toolchain_generation
    self.process_all_easyconfigs()
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 119, in process_all_easyconfigs
    EasyConfigTest.ordered_specs = resolve_dependencies(EasyConfigTest.parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/tools/robot.py", line 436, in resolve_dependencies
    processed_ecs = process_easyconfig(path, validate=not retain_all_deps, hidden=hidden)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test_sanity_check_paths (test.easyconfigs.easyconfigs.EasyConfigTest)
Make sure specified sanity check paths adher to the requirements.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 476, in test_sanity_check_paths
    self.process_all_easyconfigs()
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 119, in process_all_easyconfigs
    EasyConfigTest.ordered_specs = resolve_dependencies(EasyConfigTest.parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/tools/robot.py", line 436, in resolve_dependencies
    processed_ecs = process_easyconfig(path, validate=not retain_all_deps, hidden=hidden)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1791, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
FAIL: test_changed_files_pull_request (test.easyconfigs.easyconfigs.EasyConfigTest)
Specific checks only done for the (easyconfig) files that were changed in a pull request.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 714, in test_changed_files_pull_request
    self.assertTrue(False, error_msg)
AssertionError: Failed to find parsed easyconfig for Mesa-19.1.7-GCCcore-8.3.0.eb (and could not isolate it in easyconfigs archive either)

----------------------------------------------------------------------
Ran 8931 tests in 283.040s

FAILED (failures=1, errors=4)
ERROR: Not all tests were successful.

19162.2 - errored => https://travis-ci.org/easybuilders/easybuild-easyconfigs/jobs/633212343

*bleep, bloop, I'm just a bot (boegelbot v20180813.01)*Please talk to my owner @boegel if you notice you me acting stupid),or submit a pull request to https://github.com/boegel/boegelbot fix the problem.

easybuild/easyconfigs/l/libdrm/libdrm-2.4.99-GCCcore-8.3.0.eb

easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb

easybuild/easyconfigs/r/R/R-3.6.2-foss-2019b.eb

Don't need this patch if we merge easybuilders/easybuild-easyblocks#1938

boegelbot · 2020-01-23T09:24:13Z

Travis test report: 2/2 runs failed - see https://travis-ci.org/easybuilders/easybuild-easyconfigs/builds/640812406

Only showing partial log for 1st failed test suite run 19572.1;
full log at https://travis-ci.org/easybuilders/easybuild-easyconfigs/jobs/640812407

...
ERROR: test__parse_easyconfig_Mesa-19.1.7-GCCcore-8.3.0.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for parsing of easyconfig Mesa-19.1.7-GCCcore-8.3.0.eb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "<string>", line 1, in innertest
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 759, in template_easyconfig_test
    ecs = process_easyconfig(spec)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1793, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test__parse_easyconfig_Mesa-19.2.1-GCCcore-8.3.0.eb (test.easyconfigs.easyconfigs.EasyConfigTest)
Test for parsing of easyconfig Mesa-19.2.1-GCCcore-8.3.0.eb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "<string>", line 1, in innertest
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 759, in template_easyconfig_test
    ecs = process_easyconfig(spec)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1793, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.2.1-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 413, in test_dep_versions_per_toolchain_generation
    self.process_all_easyconfigs()
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 119, in process_all_easyconfigs
    EasyConfigTest.ordered_specs = resolve_dependencies(EasyConfigTest.parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/tools/robot.py", line 436, in resolve_dependencies
    processed_ecs = process_easyconfig(path, validate=not retain_all_deps, hidden=hidden)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1793, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
ERROR: test_sanity_check_paths (test.easyconfigs.easyconfigs.EasyConfigTest)
Make sure specified sanity check paths adher to the requirements.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 476, in test_sanity_check_paths
    self.process_all_easyconfigs()
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 119, in process_all_easyconfigs
    EasyConfigTest.ordered_specs = resolve_dependencies(EasyConfigTest.parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/tools/robot.py", line 436, in resolve_dependencies
    processed_ecs = process_easyconfig(path, validate=not retain_all_deps, hidden=hidden)
  File "/home/travis/virtualenv/python2.7.15/lib/python2.7/site-packages/easybuild/framework/easyconfig/easyconfig.py", line 1793, in process_easyconfig
    raise EasyBuildError("Failed to process easyconfig %s: %s", spec, err.msg)
EasyBuildError: "Failed to process easyconfig /home/travis/build/easybuilders/easybuild-easyconfigs/easybuild/easyconfigs/m/Mesa/Mesa-19.1.7-GCCcore-8.3.0.eb: No software-specific easyblock 'EB_Mesa' found for Mesa"

======================================================================
FAIL: test_changed_files_pull_request (test.easyconfigs.easyconfigs.EasyConfigTest)
Specific checks only done for the (easyconfig) files that were changed in a pull request.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/easybuilders/easybuild-easyconfigs/test/easyconfigs/easyconfigs.py", line 727, in test_changed_files_pull_request
    self.assertTrue(False, error_msg)
AssertionError: Failed to find parsed easyconfig for Mesa-19.1.7-GCCcore-8.3.0.eb (and could not isolate it in easyconfigs archive either)

----------------------------------------------------------------------
Ran 9017 tests in 292.089s

FAILED (failures=1, errors=4)
ERROR: Not all tests were successful.

19572.2 - errored => https://travis-ci.org/easybuilders/easybuild-easyconfigs/jobs/640812408

*bleep, bloop, I'm just a bot (boegelbot v20180813.01)*Please talk to my owner @boegel if you notice you me acting stupid),or submit a pull request to https://github.com/boegel/boegelbot fix the problem.

Flamefire · 2020-02-05T07:56:14Z

As this seemingly went stale I extracted the fix for the long double issue for R 3.6.2 into #9830 which also reduces the amount of changes

edmondac · 2020-02-13T09:20:03Z

From @Flamefire on #9538

Seems it is not so reasonable to remove liquidSVM. It was "recently" updated on CRAN and it is failing due to this on nvcc in GCCcore/8.3.0/include/c++/8.3.0/type_traits:

#if !defined(__STRICT_ANSI__) && defined(_GLIBCXX_USE_FLOAT128)
   template<>
      struct __is_floating_point_helper<__float128>
     : public true_type { };
#endif

Some more links on that: https://bugs.launchpad.net/ubuntu/+source/glibc/+bug/1717257, or even migueldiascosta@480a4df#diff-9d734c9069d6eb20c2678afc2959918aR65-R66

edmondac · 2020-02-13T09:22:42Z

As this seemingly went stale I extracted the fix for the long double issue for R 3.6.2 into #9830 which also reduces the amount of changes

It's not stale - there are just several things that need to be merged first:

easybuilders/easybuild-easyblocks#1892 then #9764

AND

#9694

Flamefire · 2020-02-13T11:42:43Z

It's not stale - there are just several things that need to be merged first:

Ah ok, they weren't mentioned initially (I guess?) and there was WIP. Anyway I'd suggest to continue with #9830 as the patch has better description and the unrelated changes are already removed.

edmondac · 2020-03-23T15:15:10Z

OK - so all that is left on here are the changes to R for ppc64le.

easybuilders/easybuild-easyblocks#1949 and #9830 will cover that - so I'll close this PR.

Changes to support building R-keras and dependencies on POWER9

9841b0e

edmondac changed the title ~~Changes to support building R-keras and dependencies on POWER9~~ WIP: Changes to support building R-keras and dependencies on POWER9 Dec 18, 2019

edmondac changed the title ~~WIP: Changes to support building R-keras and dependencies on POWER9~~ Changes to support building R-keras and dependencies on POWER9 Dec 18, 2019

Adding patch for R on ppc from https://bugs.debian.org/cgi-bin/bugrep…

f013263

…ort.cgi?bug=946836

Adding another patch for R on ppc for a new config.guess

a6092a7

edmondac changed the title ~~Changes to support building R-keras and dependencies on POWER9~~ WIP: Changes to support building R-keras and dependencies on POWER9 Dec 19, 2019

edmondac and others added 2 commits December 19, 2019 10:02

Delete R-3.6.2_config.guess.patch

6cac517

Adding another patch for R on ppc for a new config.guess for cubature

7ab5940

Removing liquidSVM as it is old and assumes intel hardware

632a356

edmondac closed this Jan 6, 2020

edmondac reopened this Jan 6, 2020

Merge branch 'develop' into 20191218143904_new_pr_Mesa1917

dc183dc

easybuilders deleted a comment from boegelbot Jan 11, 2020

boegel requested changes Jan 11, 2020

View reviewed changes

edmondac added 3 commits January 23, 2020 09:04

Update R-3.6.2-foss-2019b.eb

dec26ca

Don't need this patch if we merge easybuilders/easybuild-easyblocks#1938

Delete cubature_2.0.4_config_guess.patch

ab277de

Don't need this patch if we merge easybuilders/easybuild-easyblocks#1938

Update R-3.6.2-fosscuda-2019b.eb

431d8a8

Don't need this patch if we merge easybuilders/easybuild-easyblocks#1938

boegel added bug fix change labels Feb 10, 2020

boegel added this to the 4.x milestone Feb 10, 2020

edmondac mentioned this pull request Feb 13, 2020

{math}[foss/2019b,fosscuda/2019b] Keras v2.3.1, TensorFlow v2.1.0, libgpuarray v0.7.6, Theano v1.0.4, R-keras v2.2.5.0 w/ Python 3.7.4 #9538

Merged

edmondac changed the title ~~WIP: Changes to support building R-keras and dependencies on POWER9~~ Changes to support building R-keras and dependencies on POWER9 Feb 13, 2020

Merge branch 'develop' into 20191218143904_new_pr_Mesa1917

b9c71a5

edmondac closed this Mar 23, 2020

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Changes to support building R-keras and dependencies on POWER9 #9544

Changes to support building R-keras and dependencies on POWER9 #9544

edmondac commented Dec 18, 2019 •

edited

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edmondac commented Dec 18, 2019

edmondac commented Dec 19, 2019

edmondac commented Dec 19, 2019

boegelbot commented Dec 20, 2019

edmondac commented Dec 20, 2019

branfosj commented Dec 20, 2019

zao commented Dec 22, 2019

branfosj commented Dec 31, 2019 •

edited

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edmondac commented Jan 6, 2020

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edmondac commented Mar 23, 2020

Changes to support building R-keras and dependencies on POWER9 #9544

Changes to support building R-keras and dependencies on POWER9 #9544

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edmondac commented Dec 18, 2019 • edited Loading

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branfosj commented Dec 31, 2019 • edited Loading

edmondac commented Jan 6, 2020

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Flamefire commented Feb 5, 2020

edmondac commented Feb 13, 2020

edmondac commented Feb 13, 2020

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edmondac commented Mar 23, 2020

edmondac commented Dec 18, 2019 •

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branfosj commented Dec 31, 2019 •

edited

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